Coexpression cluster: Cluster_227 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009536 plastid 70.97% (66/93) 2.36 0.0 0.0
GO:0009507 chloroplast 69.89% (65/93) 2.37 0.0 0.0
GO:0000023 maltose metabolic process 16.13% (15/93) 4.88 0.0 0.0
GO:0019252 starch biosynthetic process 16.13% (15/93) 4.58 0.0 0.0
GO:0005984 disaccharide metabolic process 16.13% (15/93) 4.53 0.0 0.0
GO:0009311 oligosaccharide metabolic process 16.13% (15/93) 4.41 0.0 0.0
GO:0005982 starch metabolic process 16.13% (15/93) 4.3 0.0 0.0
GO:0009250 glucan biosynthetic process 16.13% (15/93) 3.98 0.0 0.0
GO:0042440 pigment metabolic process 16.13% (15/93) 3.88 0.0 0.0
GO:0010027 thylakoid membrane organization 13.98% (13/93) 4.29 0.0 0.0
GO:0009668 plastid membrane organization 13.98% (13/93) 4.29 0.0 0.0
GO:0061024 membrane organization 13.98% (13/93) 4.2 0.0 0.0
GO:0006073 cellular glucan metabolic process 16.13% (15/93) 3.58 0.0 0.0
GO:0044042 glucan metabolic process 16.13% (15/93) 3.58 0.0 0.0
GO:0009532 plastid stroma 18.28% (17/93) 3.1 0.0 0.0
GO:0009570 chloroplast stroma 18.28% (17/93) 3.1 0.0 0.0
GO:0042170 plastid membrane 15.05% (14/93) 3.4 0.0 0.0
GO:0009535 chloroplast thylakoid membrane 13.98% (13/93) 3.62 0.0 0.0
GO:0055035 plastid thylakoid membrane 13.98% (13/93) 3.61 0.0 0.0
GO:0033692 cellular polysaccharide biosynthetic process 16.13% (15/93) 3.23 0.0 0.0
GO:0016117 carotenoid biosynthetic process 9.68% (9/93) 4.73 0.0 0.0
GO:0016109 tetraterpenoid biosynthetic process 9.68% (9/93) 4.73 0.0 0.0
GO:0042651 thylakoid membrane 13.98% (13/93) 3.56 0.0 0.0
GO:0034357 photosynthetic membrane 13.98% (13/93) 3.56 0.0 0.0
GO:0009579 thylakoid 13.98% (13/93) 3.56 0.0 0.0
GO:0016108 tetraterpenoid metabolic process 9.68% (9/93) 4.66 0.0 0.0
GO:0016116 carotenoid metabolic process 9.68% (9/93) 4.66 0.0 0.0
GO:0034637 cellular carbohydrate biosynthetic process 16.13% (15/93) 3.13 0.0 0.0
GO:0043085 positive regulation of catalytic activity 9.68% (9/93) 4.54 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 23.66% (22/93) 2.35 0.0 0.0
GO:0044093 positive regulation of molecular function 9.68% (9/93) 4.52 0.0 0.0
GO:0046148 pigment biosynthetic process 11.83% (11/93) 3.76 0.0 0.0
GO:0000271 polysaccharide biosynthetic process 16.13% (15/93) 2.99 0.0 0.0
GO:0044264 cellular polysaccharide metabolic process 16.13% (15/93) 2.98 0.0 0.0
GO:0044249 cellular biosynthetic process 37.63% (35/93) 1.57 0.0 0.0
GO:1901576 organic substance biosynthetic process 39.78% (37/93) 1.5 0.0 0.0
GO:0050790 regulation of catalytic activity 10.75% (10/93) 3.9 0.0 0.0
GO:0051644 plastid localization 8.6% (8/93) 4.52 0.0 0.0
GO:0019750 chloroplast localization 8.6% (8/93) 4.52 0.0 0.0
GO:0005622 intracellular anatomical structure 13.98% (13/93) 3.16 0.0 0.0
GO:0051667 establishment of plastid localization 8.6% (8/93) 4.53 0.0 0.0
GO:0009902 chloroplast relocation 8.6% (8/93) 4.53 0.0 0.0
GO:0009059 macromolecule biosynthetic process 23.66% (22/93) 2.17 0.0 0.0
GO:0009058 biosynthetic process 39.78% (37/93) 1.45 0.0 0.0
GO:0051656 establishment of organelle localization 8.6% (8/93) 4.49 0.0 0.0
GO:0044262 cellular carbohydrate metabolic process 16.13% (15/93) 2.79 0.0 0.0
GO:0006796 phosphate-containing compound metabolic process 24.73% (23/93) 2.05 0.0 0.0
GO:0042793 plastid transcription 7.53% (7/93) 4.87 0.0 0.0
GO:0005976 polysaccharide metabolic process 16.13% (15/93) 2.76 0.0 0.0
GO:0006793 phosphorus metabolic process 24.73% (23/93) 2.03 0.0 0.0
GO:0009657 plastid organization 11.83% (11/93) 3.43 0.0 0.0
GO:0006364 rRNA processing 10.75% (10/93) 3.67 0.0 0.0
GO:0016072 rRNA metabolic process 10.75% (10/93) 3.67 0.0 0.0
GO:0006098 pentose-phosphate shunt 9.68% (9/93) 3.93 0.0 0.0
GO:0051640 organelle localization 9.68% (9/93) 3.93 0.0 0.0
GO:0065009 regulation of molecular function 10.75% (10/93) 3.6 0.0 0.0
GO:0051156 glucose 6-phosphate metabolic process 9.68% (9/93) 3.88 0.0 0.0
GO:0006740 NADPH regeneration 9.68% (9/93) 3.87 0.0 0.0
GO:0006790 sulfur compound metabolic process 16.13% (15/93) 2.66 0.0 0.0
GO:0006739 NADP metabolic process 9.68% (9/93) 3.85 0.0 0.0
GO:0044237 cellular metabolic process 52.69% (49/93) 1.06 0.0 0.0
GO:0016114 terpenoid biosynthetic process 10.75% (10/93) 3.53 0.0 0.0
GO:0034660 ncRNA metabolic process 11.83% (11/93) 3.25 0.0 0.0
GO:0034470 ncRNA processing 10.75% (10/93) 3.47 0.0 0.0
GO:0008152 metabolic process 55.91% (52/93) 0.97 0.0 0.0
GO:0006721 terpenoid metabolic process 10.75% (10/93) 3.39 0.0 1e-06
GO:0008299 isoprenoid biosynthetic process 10.75% (10/93) 3.33 0.0 1e-06
GO:0008654 phospholipid biosynthetic process 11.83% (11/93) 3.08 0.0 1e-06
GO:0009658 chloroplast organization 9.68% (9/93) 3.52 0.0 1e-06
GO:0016051 carbohydrate biosynthetic process 16.13% (15/93) 2.43 0.0 1e-06
GO:0006644 phospholipid metabolic process 11.83% (11/93) 3.0 0.0 2e-06
GO:0006720 isoprenoid metabolic process 10.75% (10/93) 3.22 0.0 2e-06
GO:1901135 carbohydrate derivative metabolic process 18.28% (17/93) 2.2 0.0 2e-06
GO:0010207 photosystem II assembly 8.6% (8/93) 3.76 0.0 2e-06
GO:0071704 organic substance metabolic process 51.61% (48/93) 0.97 0.0 2e-06
GO:0019637 organophosphate metabolic process 18.28% (17/93) 2.15 0.0 3e-06
GO:0009941 chloroplast envelope 12.9% (12/93) 2.73 0.0 3e-06
GO:0009526 plastid envelope 12.9% (12/93) 2.72 0.0 3e-06
GO:0046483 heterocycle metabolic process 29.03% (27/93) 1.52 0.0 3e-06
GO:0044281 small molecule metabolic process 27.96% (26/93) 1.56 0.0 4e-06
GO:0006778 porphyrin-containing compound metabolic process 8.6% (8/93) 3.57 0.0 4e-06
GO:0016143 S-glycoside metabolic process 8.6% (8/93) 3.56 0.0 4e-06
GO:0019757 glycosinolate metabolic process 8.6% (8/93) 3.56 0.0 4e-06
GO:0033013 tetrapyrrole metabolic process 8.6% (8/93) 3.56 0.0 4e-06
GO:0019760 glucosinolate metabolic process 8.6% (8/93) 3.56 0.0 4e-06
GO:0008610 lipid biosynthetic process 17.2% (16/93) 2.15 1e-06 5e-06
GO:0009534 chloroplast thylakoid 8.6% (8/93) 3.49 1e-06 6e-06
GO:0031976 plastid thylakoid 8.6% (8/93) 3.49 1e-06 6e-06
GO:0043231 intracellular membrane-bounded organelle 83.87% (78/93) 0.48 1e-06 6e-06
GO:0044238 primary metabolic process 46.24% (43/93) 1.01 1e-06 6e-06
GO:0043227 membrane-bounded organelle 83.87% (78/93) 0.48 1e-06 6e-06
GO:0016070 RNA metabolic process 19.35% (18/93) 1.95 1e-06 7e-06
GO:0031967 organelle envelope 12.9% (12/93) 2.57 1e-06 8e-06
GO:0031975 envelope 12.9% (12/93) 2.57 1e-06 8e-06
GO:0031163 metallo-sulfur cluster assembly 6.45% (6/93) 4.17 1e-06 1e-05
GO:0016226 iron-sulfur cluster assembly 6.45% (6/93) 4.17 1e-06 1e-05
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 8.6% (8/93) 3.38 1e-06 1e-05
GO:0019682 glyceraldehyde-3-phosphate metabolic process 8.6% (8/93) 3.38 1e-06 1e-05
GO:0090407 organophosphate biosynthetic process 13.98% (13/93) 2.39 1e-06 1e-05
GO:0043226 organelle 83.87% (78/93) 0.46 1e-06 1e-05
GO:0043229 intracellular organelle 83.87% (78/93) 0.47 1e-06 1e-05
GO:0009240 isopentenyl diphosphate biosynthetic process 8.6% (8/93) 3.36 1e-06 1e-05
GO:0046490 isopentenyl diphosphate metabolic process 8.6% (8/93) 3.36 1e-06 1e-05
GO:1901657 glycosyl compound metabolic process 8.6% (8/93) 3.35 1e-06 1.1e-05
GO:0006807 nitrogen compound metabolic process 39.78% (37/93) 1.11 1e-06 1.1e-05
GO:0044255 cellular lipid metabolic process 17.2% (16/93) 2.04 1e-06 1.2e-05
GO:0015994 chlorophyll metabolic process 7.53% (7/93) 3.61 2e-06 1.5e-05
GO:1901360 organic cyclic compound metabolic process 30.11% (28/93) 1.35 2e-06 1.5e-05
GO:0097659 nucleic acid-templated transcription 7.53% (7/93) 3.56 2e-06 1.8e-05
GO:0006351 transcription, DNA-templated 7.53% (7/93) 3.56 2e-06 1.8e-05
GO:0006725 cellular aromatic compound metabolic process 29.03% (27/93) 1.37 2e-06 1.8e-05
GO:0043436 oxoacid metabolic process 21.51% (20/93) 1.68 3e-06 2.2e-05
GO:0034641 cellular nitrogen compound metabolic process 27.96% (26/93) 1.38 3e-06 2.5e-05
GO:0006082 organic acid metabolic process 21.51% (20/93) 1.65 4e-06 3.2e-05
GO:0005975 carbohydrate metabolic process 17.2% (16/93) 1.9 5e-06 3.8e-05
GO:0022607 cellular component assembly 12.9% (12/93) 2.32 5e-06 3.9e-05
GO:0031399 regulation of protein modification process 7.53% (7/93) 3.37 5e-06 4.1e-05
GO:0006091 generation of precursor metabolites and energy 11.83% (11/93) 2.45 6e-06 4.2e-05
GO:0009987 cellular process 59.14% (55/93) 0.7 7e-06 5.4e-05
GO:0035304 regulation of protein dephosphorylation 6.45% (6/93) 3.68 8e-06 5.7e-05
GO:0035303 regulation of dephosphorylation 6.45% (6/93) 3.67 8e-06 5.9e-05
GO:0031090 organelle membrane 15.05% (14/93) 1.98 1.1e-05 8.1e-05
GO:0006090 pyruvate metabolic process 9.68% (9/93) 2.69 1.1e-05 8.1e-05
GO:0006396 RNA processing 12.9% (12/93) 2.19 1.2e-05 8.7e-05
GO:0006081 cellular aldehyde metabolic process 8.6% (8/93) 2.87 1.5e-05 0.000103
GO:0019438 aromatic compound biosynthetic process 16.13% (15/93) 1.85 1.6e-05 0.000112
GO:1901566 organonitrogen compound biosynthetic process 17.2% (16/93) 1.75 1.8e-05 0.000125
GO:0043170 macromolecule metabolic process 34.41% (32/93) 1.07 1.8e-05 0.000125
GO:0034622 cellular protein-containing complex assembly 9.68% (9/93) 2.56 2.3e-05 0.000156
GO:0016144 S-glycoside biosynthetic process 6.45% (6/93) 3.4 2.3e-05 0.000157
GO:0019758 glycosinolate biosynthetic process 6.45% (6/93) 3.4 2.3e-05 0.000157
GO:0019761 glucosinolate biosynthetic process 6.45% (6/93) 3.4 2.3e-05 0.000157
GO:0018130 heterocycle biosynthetic process 13.98% (13/93) 1.97 2.6e-05 0.000171
GO:0006629 lipid metabolic process 17.2% (16/93) 1.71 2.6e-05 0.000173
GO:1901564 organonitrogen compound metabolic process 31.18% (29/93) 1.12 2.6e-05 0.000173
GO:1901659 glycosyl compound biosynthetic process 6.45% (6/93) 3.36 2.8e-05 0.000179
GO:0065003 protein-containing complex assembly 9.68% (9/93) 2.5 3.1e-05 0.000202
GO:1901362 organic cyclic compound biosynthetic process 17.2% (16/93) 1.68 3.3e-05 0.00021
GO:0044272 sulfur compound biosynthetic process 9.68% (9/93) 2.49 3.3e-05 0.000211
GO:0033015 tetrapyrrole catabolic process 4.3% (4/93) 4.43 3.6e-05 0.000222
GO:0006787 porphyrin-containing compound catabolic process 4.3% (4/93) 4.43 3.6e-05 0.000222
GO:0015996 chlorophyll catabolic process 4.3% (4/93) 4.43 3.6e-05 0.000222
GO:0046149 pigment catabolic process 4.3% (4/93) 4.43 3.6e-05 0.000222
GO:0043933 protein-containing complex subunit organization 9.68% (9/93) 2.46 3.8e-05 0.000231
GO:0090304 nucleic acid metabolic process 19.35% (18/93) 1.54 3.8e-05 0.000231
GO:0032268 regulation of cellular protein metabolic process 7.53% (7/93) 2.94 3.8e-05 0.000232
GO:0009965 leaf morphogenesis 6.45% (6/93) 3.25 4.3e-05 0.000256
GO:0015979 photosynthesis 6.45% (6/93) 3.24 4.4e-05 0.00026
GO:0051246 regulation of protein metabolic process 7.53% (7/93) 2.9 4.4e-05 0.000261
GO:0016556 mRNA modification 5.38% (5/93) 3.69 4.4e-05 0.000261
GO:0051174 regulation of phosphorus metabolic process 6.45% (6/93) 3.19 5.4e-05 0.000312
GO:0019220 regulation of phosphate metabolic process 6.45% (6/93) 3.19 5.4e-05 0.000312
GO:0003824 catalytic activity 41.94% (39/93) 0.84 6e-05 0.000349
GO:0004332 fructose-bisphosphate aldolase activity 2.15% (2/93) 7.22 6.7e-05 0.000384
GO:0019752 carboxylic acid metabolic process 18.28% (17/93) 1.53 6.8e-05 0.000386
GO:0032774 RNA biosynthetic process 7.53% (7/93) 2.79 7.3e-05 0.000416
GO:0044283 small molecule biosynthetic process 15.05% (14/93) 1.71 8.7e-05 0.000493
GO:0016020 membrane 33.33% (31/93) 0.97 9.4e-05 0.000525
GO:0006139 nucleobase-containing compound metabolic process 21.51% (20/93) 1.31 0.000117 0.000654
GO:0044260 cellular macromolecule metabolic process 26.88% (25/93) 1.11 0.000131 0.000724
GO:0010155 regulation of proton transport 4.3% (4/93) 3.95 0.000134 0.000739
GO:0045893 positive regulation of transcription, DNA-templated 8.6% (8/93) 2.4 0.000143 0.000761
GO:1903508 positive regulation of nucleic acid-templated transcription 8.6% (8/93) 2.4 0.000143 0.000761
GO:1902680 positive regulation of RNA biosynthetic process 8.6% (8/93) 2.4 0.000143 0.000761
GO:0051254 positive regulation of RNA metabolic process 8.6% (8/93) 2.4 0.000143 0.000761
GO:0046777 protein autophosphorylation 5.38% (5/93) 3.34 0.000141 0.000773
GO:1904062 regulation of cation transmembrane transport 4.3% (4/93) 3.91 0.000148 0.000787
GO:0031984 organelle subcompartment 8.6% (8/93) 2.38 0.000154 0.000806
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 8.6% (8/93) 2.38 0.000154 0.000806
GO:0010557 positive regulation of macromolecule biosynthetic process 8.6% (8/93) 2.32 0.000209 0.001087
GO:0031977 thylakoid lumen 4.3% (4/93) 3.76 0.000225 0.001159
GO:0065007 biological regulation 34.41% (32/93) 0.88 0.000224 0.001161
GO:0031328 positive regulation of cellular biosynthetic process 8.6% (8/93) 2.3 0.00023 0.001179
GO:0051173 positive regulation of nitrogen compound metabolic process 8.6% (8/93) 2.29 0.000234 0.001189
GO:0010604 positive regulation of macromolecule metabolic process 8.6% (8/93) 2.26 0.000275 0.001393
GO:0009073 aromatic amino acid family biosynthetic process 4.3% (4/93) 3.66 0.00029 0.001458
GO:0031325 positive regulation of cellular metabolic process 8.6% (8/93) 2.24 0.000298 0.001492
GO:0000293 ferric-chelate reductase activity 2.15% (2/93) 6.22 0.000309 0.001529
GO:0016722 oxidoreductase activity, acting on metal ions 2.15% (2/93) 6.22 0.000309 0.001529
GO:0006520 cellular amino acid metabolic process 9.68% (9/93) 2.02 0.000381 0.001871
GO:0010206 photosystem II repair 2.15% (2/93) 5.89 0.000495 0.002405
GO:0030091 protein repair 2.15% (2/93) 5.89 0.000495 0.002405
GO:0016491 oxidoreductase activity 11.83% (11/93) 1.71 0.000542 0.002619
GO:0034765 regulation of ion transmembrane transport 4.3% (4/93) 3.42 0.000545 0.002623
GO:1905392 plant organ morphogenesis 6.45% (6/93) 2.54 0.000605 0.002893
GO:0044550 secondary metabolite biosynthetic process 6.45% (6/93) 2.52 0.000636 0.003028
GO:0034762 regulation of transmembrane transport 4.3% (4/93) 3.33 0.000686 0.003248
GO:0009891 positive regulation of biosynthetic process 8.6% (8/93) 2.02 0.000814 0.003833
GO:0110165 cellular anatomical entity 95.7% (89/93) 0.18 0.00082 0.003842
GO:0044271 cellular nitrogen compound biosynthetic process 12.9% (12/93) 1.54 0.000845 0.003934
GO:0034654 nucleobase-containing compound biosynthetic process 8.6% (8/93) 1.97 0.00101 0.00468
GO:0009072 aromatic amino acid family metabolic process 5.38% (5/93) 2.69 0.001093 0.005038
GO:0009893 positive regulation of metabolic process 8.6% (8/93) 1.95 0.00111 0.005089
GO:0019748 secondary metabolic process 8.6% (8/93) 1.95 0.001121 0.005115
GO:0006779 porphyrin-containing compound biosynthetic process 4.3% (4/93) 3.14 0.001133 0.005143
GO:0033014 tetrapyrrole biosynthetic process 4.3% (4/93) 3.1 0.001262 0.0057
GO:0032787 monocarboxylic acid metabolic process 12.9% (12/93) 1.46 0.001367 0.006142
GO:0009767 photosynthetic electron transport chain 3.23% (3/93) 3.78 0.001383 0.006181
GO:0043269 regulation of ion transport 4.3% (4/93) 3.06 0.001401 0.006232
GO:0010287 plastoglobule 3.23% (3/93) 3.71 0.001575 0.00697
GO:0016832 aldehyde-lyase activity 2.15% (2/93) 5.05 0.001653 0.007277
GO:0031978 plastid thylakoid lumen 3.23% (3/93) 3.65 0.001783 0.007775
GO:0009543 chloroplast thylakoid lumen 3.23% (3/93) 3.65 0.001783 0.007775
GO:0016053 organic acid biosynthetic process 10.75% (10/93) 1.58 0.001931 0.008375
GO:0048522 positive regulation of cellular process 8.6% (8/93) 1.78 0.002366 0.010214
GO:0008150 biological_process 87.1% (81/93) 0.22 0.002378 0.010217
GO:0046700 heterocycle catabolic process 5.38% (5/93) 2.43 0.002428 0.010382
GO:0016043 cellular component organization 18.28% (17/93) 1.08 0.00247 0.010458
GO:0019439 aromatic compound catabolic process 5.38% (5/93) 2.42 0.002467 0.010495
GO:0044270 cellular nitrogen compound catabolic process 5.38% (5/93) 2.42 0.002505 0.010557
GO:0051641 cellular localization 11.83% (11/93) 1.42 0.00262 0.010987
GO:1901361 organic cyclic compound catabolic process 5.38% (5/93) 2.4 0.002664 0.011121
GO:0051049 regulation of transport 4.3% (4/93) 2.76 0.00292 0.012132
GO:0046474 glycerophospholipid biosynthetic process 4.3% (4/93) 2.75 0.003041 0.012578
GO:0043014 alpha-tubulin binding 1.08% (1/93) 8.22 0.003363 0.012719
GO:0018131 oxazole or thiazole biosynthetic process 1.08% (1/93) 8.22 0.003363 0.012719
GO:0016166 phytoene dehydrogenase activity 1.08% (1/93) 8.22 0.003363 0.012719
GO:0010276 phytol kinase activity 1.08% (1/93) 8.22 0.003363 0.012719
GO:0010357 homogentisate solanesyltransferase activity 1.08% (1/93) 8.22 0.003363 0.012719
GO:0046408 chlorophyll synthetase activity 1.08% (1/93) 8.22 0.003363 0.012719
GO:0051721 protein phosphatase 2A binding 1.08% (1/93) 8.22 0.003363 0.012719
GO:0090042 tubulin deacetylation 1.08% (1/93) 8.22 0.003363 0.012719
GO:0031063 regulation of histone deacetylation 1.08% (1/93) 8.22 0.003363 0.012719
GO:0090311 regulation of protein deacetylation 1.08% (1/93) 8.22 0.003363 0.012719
GO:0015813 L-glutamate transmembrane transport 1.08% (1/93) 8.22 0.003363 0.012719
GO:0046484 oxazole or thiazole metabolic process 1.08% (1/93) 8.22 0.003363 0.012719
GO:0003992 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity 1.08% (1/93) 8.22 0.003363 0.012719
GO:0010355 homogentisate farnesyltransferase activity 1.08% (1/93) 8.22 0.003363 0.012719
GO:1902475 L-alpha-amino acid transmembrane transport 1.08% (1/93) 8.22 0.003363 0.012719
GO:1902171 regulation of tocopherol cyclase activity 1.08% (1/93) 8.22 0.003363 0.012719
GO:0031279 regulation of cyclase activity 1.08% (1/93) 8.22 0.003363 0.012719
GO:0010356 homogentisate geranylgeranyltransferase activity 1.08% (1/93) 8.22 0.003363 0.012719
GO:0033721 aldehyde dehydrogenase (NADP+) activity 1.08% (1/93) 8.22 0.003363 0.012719
GO:0042903 tubulin deacetylase activity 1.08% (1/93) 8.22 0.003363 0.012719
GO:0010109 regulation of photosynthesis 2.15% (2/93) 4.52 0.00345 0.012992
GO:0022900 electron transport chain 3.23% (3/93) 3.29 0.003612 0.013544
GO:0006650 glycerophospholipid metabolic process 4.3% (4/93) 2.68 0.003631 0.013559
GO:0006996 organelle organization 11.83% (11/93) 1.35 0.003775 0.014036
GO:0045017 glycerolipid biosynthetic process 4.3% (4/93) 2.63 0.004064 0.01505
GO:0051649 establishment of localization in cell 10.75% (10/93) 1.42 0.004238 0.015627
GO:0009451 RNA modification 5.38% (5/93) 2.19 0.004864 0.01786
GO:0046486 glycerolipid metabolic process 4.3% (4/93) 2.53 0.005209 0.018972
GO:0009064 glutamine family amino acid metabolic process 2.15% (2/93) 4.22 0.005196 0.019004
GO:0004659 prenyltransferase activity 2.15% (2/93) 4.17 0.00552 0.02002
GO:0032879 regulation of localization 4.3% (4/93) 2.48 0.005855 0.021151
GO:0071840 cellular component organization or biogenesis 18.28% (17/93) 0.95 0.005967 0.021466
GO:1901137 carbohydrate derivative biosynthetic process 6.45% (6/93) 1.87 0.006074 0.021762
GO:0015995 chlorophyll biosynthetic process 3.23% (3/93) 3.02 0.006129 0.021872
GO:0016071 mRNA metabolic process 5.38% (5/93) 2.1 0.006384 0.022691
GO:0033743 peptide-methionine (R)-S-oxide reductase activity 1.08% (1/93) 7.22 0.006715 0.023488
GO:0015131 oxaloacetate transmembrane transporter activity 1.08% (1/93) 7.22 0.006715 0.023488
GO:0015729 oxaloacetate transport 1.08% (1/93) 7.22 0.006715 0.023488
GO:0010354 homogentisate prenyltransferase activity 1.08% (1/93) 7.22 0.006715 0.023488
GO:1901605 alpha-amino acid metabolic process 6.45% (6/93) 1.81 0.007478 0.026056
GO:0046165 alcohol biosynthetic process 3.23% (3/93) 2.89 0.007786 0.027022
GO:0030154 cell differentiation 6.45% (6/93) 1.77 0.008562 0.029599
GO:1901565 organonitrogen compound catabolic process 6.45% (6/93) 1.76 0.008869 0.030541
GO:0004325 ferrochelatase activity 1.08% (1/93) 6.63 0.010055 0.032837
GO:0003951 NAD+ kinase activity 1.08% (1/93) 6.63 0.010055 0.032837
GO:0004103 choline kinase activity 1.08% (1/93) 6.63 0.010055 0.032837
GO:0015139 alpha-ketoglutarate transmembrane transporter activity 1.08% (1/93) 6.63 0.010055 0.032837
GO:0080005 photosystem stoichiometry adjustment 1.08% (1/93) 6.63 0.010055 0.032837
GO:0003333 amino acid transmembrane transport 1.08% (1/93) 6.63 0.010055 0.032837
GO:0015807 L-amino acid transport 1.08% (1/93) 6.63 0.010055 0.032837
GO:0031357 integral component of chloroplast inner membrane 1.08% (1/93) 6.63 0.010055 0.032837
GO:0031352 intrinsic component of plastid inner membrane 1.08% (1/93) 6.63 0.010055 0.032837
GO:0031353 integral component of plastid inner membrane 1.08% (1/93) 6.63 0.010055 0.032837
GO:0015367 oxoglutarate:malate antiporter activity 1.08% (1/93) 6.63 0.010055 0.032837
GO:0031356 intrinsic component of chloroplast inner membrane 1.08% (1/93) 6.63 0.010055 0.032837
GO:0048487 beta-tubulin binding 1.08% (1/93) 6.63 0.010055 0.032837
GO:0048518 positive regulation of biological process 8.6% (8/93) 1.43 0.009939 0.034094
GO:0009718 anthocyanin-containing compound biosynthetic process 2.15% (2/93) 3.63 0.011414 0.037136
GO:0046394 carboxylic acid biosynthetic process 8.6% (8/93) 1.39 0.011618 0.037662
GO:0010103 stomatal complex morphogenesis 3.23% (3/93) 2.67 0.011827 0.038061
GO:0090626 plant epidermis morphogenesis 3.23% (3/93) 2.67 0.011827 0.038061
GO:0009653 anatomical structure morphogenesis 9.68% (9/93) 1.25 0.013423 0.041537
GO:0042724 thiamine-containing compound biosynthetic process 1.08% (1/93) 6.22 0.013385 0.041562
GO:0005313 L-glutamate transmembrane transporter activity 1.08% (1/93) 6.22 0.013385 0.041562
GO:0034309 primary alcohol biosynthetic process 1.08% (1/93) 6.22 0.013385 0.041562
GO:0019740 nitrogen utilization 1.08% (1/93) 6.22 0.013385 0.041562
GO:0019676 ammonia assimilation cycle 1.08% (1/93) 6.22 0.013385 0.041562
GO:0019902 phosphatase binding 1.08% (1/93) 6.22 0.013385 0.041562
GO:0071423 malate transmembrane transport 1.08% (1/93) 6.22 0.013385 0.041562
GO:0009650 UV protection 1.08% (1/93) 6.22 0.013385 0.041562
GO:0009228 thiamine biosynthetic process 1.08% (1/93) 6.22 0.013385 0.041562
GO:0019903 protein phosphatase binding 1.08% (1/93) 6.22 0.013385 0.041562
GO:0046283 anthocyanin-containing compound metabolic process 2.15% (2/93) 3.49 0.013793 0.042531
GO:0008237 metallopeptidase activity 2.15% (2/93) 3.46 0.014292 0.043918
GO:0048481 plant ovule development 3.23% (3/93) 2.56 0.014476 0.044178
GO:0010468 regulation of gene expression 15.05% (14/93) 0.93 0.014476 0.044329
GO:0009110 vitamin biosynthetic process 2.15% (2/93) 3.38 0.015837 0.047672
GO:0006355 regulation of transcription, DNA-templated 12.9% (12/93) 1.01 0.015747 0.047726
GO:1903506 regulation of nucleic acid-templated transcription 12.9% (12/93) 1.01 0.015747 0.047726
GO:2001141 regulation of RNA biosynthetic process 12.9% (12/93) 1.01 0.015811 0.047755
GO:0015800 acidic amino acid transport 1.08% (1/93) 5.89 0.016703 0.049939
GO:0071493 cellular response to UV-B 1.08% (1/93) 5.89 0.016703 0.049939
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_7 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_16 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_42 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_47 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_48 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_67 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_78 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_98 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_105 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_113 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_151 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_158 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_188 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_255 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_259 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_263 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_1 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_4 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_37 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_40 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_65 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_82 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_84 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_103 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_110 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_122 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_139 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_156 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_2 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_11 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_14 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_23 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_61 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_74 0.035 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_84 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_103 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_110 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_112 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_147 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_149 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_156 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_163 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_8 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_18 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_19 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_22 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_26 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_51 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_69 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_82 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_103 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_120 0.048 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_136 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_142 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_151 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_170 0.034 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_171 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_177 0.046 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_193 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_231 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_247 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_277 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_278 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_304 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_30 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_66 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_90 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_118 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_127 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_131 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_144 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_168 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_169 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_178 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_180 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (93) (download table)

InterPro Domains

GO Terms

Family Terms