Coexpression cluster: Cluster_80 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 56.82% (25/44) 6.39 0.0 0.0
GO:0005198 structural molecule activity 56.82% (25/44) 6.29 0.0 0.0
GO:0006412 translation 54.55% (24/44) 6.36 0.0 0.0
GO:0043043 peptide biosynthetic process 54.55% (24/44) 6.31 0.0 0.0
GO:0043604 amide biosynthetic process 54.55% (24/44) 6.29 0.0 0.0
GO:0006518 peptide metabolic process 54.55% (24/44) 6.27 0.0 0.0
GO:0043603 cellular amide metabolic process 54.55% (24/44) 6.25 0.0 0.0
GO:0005840 ribosome 52.27% (23/44) 6.33 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 52.27% (23/44) 6.15 0.0 0.0
GO:0043228 non-membrane-bounded organelle 52.27% (23/44) 6.15 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 54.55% (24/44) 5.71 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 56.82% (25/44) 5.49 0.0 0.0
GO:0009059 macromolecule biosynthetic process 54.55% (24/44) 5.57 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 56.82% (25/44) 4.82 0.0 0.0
GO:0043229 intracellular organelle 52.27% (23/44) 5.18 0.0 0.0
GO:0043226 organelle 52.27% (23/44) 5.18 0.0 0.0
GO:0044249 cellular biosynthetic process 56.82% (25/44) 4.42 0.0 0.0
GO:1901576 organic substance biosynthetic process 56.82% (25/44) 4.36 0.0 0.0
GO:0009058 biosynthetic process 56.82% (25/44) 4.24 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 56.82% (25/44) 3.94 0.0 0.0
GO:0005622 intracellular anatomical structure 34.09% (15/44) 6.14 0.0 0.0
GO:0044267 cellular protein metabolic process 54.55% (24/44) 3.49 0.0 0.0
GO:0110165 cellular anatomical entity 54.55% (24/44) 3.35 0.0 0.0
GO:0019538 protein metabolic process 54.55% (24/44) 3.26 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 54.55% (24/44) 3.22 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 56.82% (25/44) 3.07 0.0 0.0
GO:0005575 cellular_component 56.82% (25/44) 3.02 0.0 0.0
GO:0043170 macromolecule metabolic process 54.55% (24/44) 2.85 0.0 0.0
GO:0006807 nitrogen compound metabolic process 56.82% (25/44) 2.64 0.0 0.0
GO:0044237 cellular metabolic process 56.82% (25/44) 2.6 0.0 0.0
GO:0009987 cellular process 61.36% (27/44) 2.26 0.0 0.0
GO:0071704 organic substance metabolic process 56.82% (25/44) 2.44 0.0 0.0
GO:0044238 primary metabolic process 54.55% (24/44) 2.45 0.0 0.0
GO:0008152 metabolic process 56.82% (25/44) 2.31 0.0 0.0
GO:0008150 biological_process 61.36% (27/44) 1.94 0.0 0.0
GO:0003674 molecular_function 63.64% (28/44) 1.22 1e-06 1e-06
GO:0003723 RNA binding 11.36% (5/44) 3.78 3.1e-05 7.1e-05
GO:0019843 rRNA binding 4.55% (2/44) 6.85 0.000125 0.000283
GO:0034312 diol biosynthetic process 2.27% (1/44) 7.66 0.004954 0.009683
GO:0034311 diol metabolic process 2.27% (1/44) 7.66 0.004954 0.009683
GO:0046146 tetrahydrobiopterin metabolic process 2.27% (1/44) 7.66 0.004954 0.009683
GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity 2.27% (1/44) 7.66 0.004954 0.009683
GO:0006729 tetrahydrobiopterin biosynthetic process 2.27% (1/44) 7.66 0.004954 0.009683
GO:0003676 nucleic acid binding 13.64% (6/44) 1.94 0.004416 0.009738
GO:0003747 translation release factor activity 2.27% (1/44) 7.07 0.007422 0.013581
GO:0008079 translation termination factor activity 2.27% (1/44) 7.07 0.007422 0.013581
GO:0015934 large ribosomal subunit 2.27% (1/44) 7.07 0.007422 0.013581
GO:0046173 polyol biosynthetic process 2.27% (1/44) 6.66 0.009885 0.015742
GO:0042559 pteridine-containing compound biosynthetic process 2.27% (1/44) 6.66 0.009885 0.015742
GO:0043624 cellular protein complex disassembly 2.27% (1/44) 6.66 0.009885 0.015742
GO:0044391 ribosomal subunit 2.27% (1/44) 6.66 0.009885 0.015742
GO:0006415 translational termination 2.27% (1/44) 6.66 0.009885 0.015742
GO:0022411 cellular component disassembly 2.27% (1/44) 6.66 0.009885 0.015742
GO:0032984 protein-containing complex disassembly 2.27% (1/44) 6.66 0.009885 0.015742
GO:0042558 pteridine-containing compound metabolic process 2.27% (1/44) 6.33 0.012341 0.019296
GO:0046165 alcohol biosynthetic process 2.27% (1/44) 6.07 0.014791 0.022715
GO:1901617 organic hydroxy compound biosynthetic process 2.27% (1/44) 5.85 0.017235 0.025556
GO:0019751 polyol metabolic process 2.27% (1/44) 5.85 0.017235 0.025556
GO:0006066 alcohol metabolic process 2.27% (1/44) 5.49 0.022106 0.032222
GO:0071840 cellular component organization or biogenesis 4.55% (2/44) 2.97 0.026956 0.036797
GO:0022613 ribonucleoprotein complex biogenesis 2.27% (1/44) 5.2 0.026953 0.037387
GO:0042254 ribosome biogenesis 2.27% (1/44) 5.2 0.026953 0.037387
GO:1901615 organic hydroxy compound metabolic process 2.27% (1/44) 5.2 0.026953 0.037387
GO:0044085 cellular component biogenesis 2.27% (1/44) 5.07 0.029368 0.039463
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_2 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_39 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_53 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_98 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_107 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_185 0.035 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_38 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_50 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_84 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_103 0.347 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_51 0.185 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_152 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_170 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_267 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_20 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_66 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_90 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_126 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_127 0.033 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (44) (download table)

InterPro Domains

GO Terms

Family Terms