Zci_08244.1

Description : component eL36 of LSU proteome component

Gene families : OG_01_0001837 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001837_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zci_08244.1
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
AT2G37600	No alias	Ribosomal protein L36e family protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G53740	No alias	Ribosomal protein L36e family protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G02450	No alias	Ribosomal protein L36e family protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g484050	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g05460.1	No alias	component RPL36 of LSU proteome component	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_19960V3.1	No alias	Ribosomal protein L36e family protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_32310V3.1	No alias	Ribosomal protein L36e family protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_9650V3.1	No alias	Ribosomal protein L36e family protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000966	RNA 5'-end processing	IEP	HCCA
BP	GO:0001682	tRNA 5'-leader removal	IEP	HCCA
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006771	riboflavin metabolic process	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009231	riboflavin biosynthetic process	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
CC	GO:0030677	ribonuclease P complex	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0034471	ncRNA 5'-end processing	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042726	flavin-containing compound metabolic process	IEP	HCCA
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0099116	tRNA 5'-end processing	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
CC	GO:1902555	endoribonuclease complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000509	Ribosomal_L36e	3	95

External Links

No external refs found!

Zci_08244.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation