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  5. AT5G53250

AT5G53250


Description : arabinogalactan protein 22


Gene families : OG_01_0004214 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004214_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53250
Cluster HCCA: Cluster_111


Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006826 iron ion transport RCA Interproscan
BP GO:0010054 trichoblast differentiation RCA Interproscan
BP GO:0010106 cellular response to iron ion starvation RCA Interproscan
BP GO:0010167 response to nitrate RCA Interproscan
BP GO:0015706 nitrate transport RCA Interproscan
BP GO:0016132 brassinosteroid biosynthetic process RCA Interproscan
CC GO:0031225 anchored component of membrane TAS Interproscan
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Type GO Term Name Evidence Source
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009735 response to cytokinin IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009424 AGP16/20/22/41 31 63
PLAZA 3.0 Dicots AT5G53250