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Description : Nucleotide excision repair, TFIIH, subunit TTDA
Gene families : OG_01_0006430 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006430_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G62886 | |
| Cluster | HCCA: Cluster_111 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006312 | mitotic recombination | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008121 | ubiquinol-cytochrome-c reductase activity | IEP | HCCA |
| BP | GO:0009060 | aerobic respiration | IEP | HCCA |
| MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
| CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | HCCA |
| BP | GO:0019646 | aerobic electron transport chain | IEP | HCCA |
| CC | GO:0022625 | cytosolic large ribosomal subunit | IEP | HCCA |
| BP | GO:0022904 | respiratory electron transport chain | IEP | HCCA |
| BP | GO:0032204 | regulation of telomere maintenance | IEP | HCCA |
| BP | GO:0032504 | multicellular organism reproduction | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043247 | telomere maintenance in response to DNA damage | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
| CC | GO:0045275 | respiratory chain complex III | IEP | HCCA |
| BP | GO:0051026 | chiasma assembly | IEP | HCCA |
| CC | GO:0070069 | cytochrome complex | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009400 | TFIIH_TTDA/Tfb5 | 1 | 70 |
| PLAZA 3.0 Dicots | AT1G62886 |