Coexpression cluster: Cluster_149 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009507 chloroplast 69.62% (55/79) 2.36 0.0 0.0
GO:0009536 plastid 69.62% (55/79) 2.33 0.0 0.0
GO:0016070 RNA metabolic process 46.84% (37/79) 3.23 0.0 0.0
GO:0090304 nucleic acid metabolic process 49.37% (39/79) 2.89 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 49.37% (39/79) 2.51 0.0 0.0
GO:0034660 ncRNA metabolic process 25.32% (20/79) 4.35 0.0 0.0
GO:0009658 chloroplast organization 22.78% (18/79) 4.75 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 53.16% (42/79) 2.24 0.0 0.0
GO:0046483 heterocycle metabolic process 50.63% (40/79) 2.32 0.0 0.0
GO:0009657 plastid organization 22.78% (18/79) 4.38 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 53.16% (42/79) 2.17 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 50.63% (40/79) 2.24 0.0 0.0
GO:0006399 tRNA metabolic process 16.46% (13/79) 5.41 0.0 0.0
GO:0006807 nitrogen compound metabolic process 59.49% (47/79) 1.69 0.0 0.0
GO:0061024 membrane organization 17.72% (14/79) 4.54 0.0 0.0
GO:0043170 macromolecule metabolic process 55.7% (44/79) 1.76 0.0 0.0
GO:0044237 cellular metabolic process 67.09% (53/79) 1.41 0.0 0.0
GO:0010027 thylakoid membrane organization 16.46% (13/79) 4.53 0.0 0.0
GO:0009668 plastid membrane organization 16.46% (13/79) 4.53 0.0 0.0
GO:0071840 cellular component organization or biogenesis 41.77% (33/79) 2.14 0.0 0.0
GO:0006396 RNA processing 25.32% (20/79) 3.16 0.0 0.0
GO:0009793 embryo development ending in seed dormancy 21.52% (17/79) 3.49 0.0 0.0
GO:0009790 embryo development 21.52% (17/79) 3.49 0.0 0.0
GO:0008152 metabolic process 68.35% (54/79) 1.26 0.0 0.0
GO:0031163 metallo-sulfur cluster assembly 12.66% (10/79) 5.14 0.0 0.0
GO:0016226 iron-sulfur cluster assembly 12.66% (10/79) 5.14 0.0 0.0
GO:0044238 primary metabolic process 60.76% (48/79) 1.41 0.0 0.0
GO:0034470 ncRNA processing 16.46% (13/79) 4.09 0.0 0.0
GO:0016043 cellular component organization 37.97% (30/79) 2.13 0.0 0.0
GO:0016556 mRNA modification 12.66% (10/79) 4.93 0.0 0.0
GO:0006364 rRNA processing 15.19% (12/79) 4.17 0.0 0.0
GO:0016072 rRNA metabolic process 15.19% (12/79) 4.17 0.0 0.0
GO:0009451 RNA modification 16.46% (13/79) 3.81 0.0 0.0
GO:0071704 organic substance metabolic process 62.03% (49/79) 1.23 0.0 0.0
GO:0045036 protein targeting to chloroplast 10.13% (8/79) 5.3 0.0 0.0
GO:0072598 protein localization to chloroplast 10.13% (8/79) 5.3 0.0 0.0
GO:0042793 plastid transcription 10.13% (8/79) 5.3 0.0 0.0
GO:0072596 establishment of protein localization to chloroplast 10.13% (8/79) 5.3 0.0 0.0
GO:0009987 cellular process 73.42% (58/79) 1.01 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 13.92% (11/79) 4.08 0.0 0.0
GO:0140640 catalytic activity, acting on a nucleic acid 16.46% (13/79) 3.6 0.0 0.0
GO:0031425 chloroplast RNA processing 6.33% (5/79) 7.07 0.0 0.0
GO:0016071 mRNA metabolic process 15.19% (12/79) 3.6 0.0 0.0
GO:0007275 multicellular organism development 21.52% (17/79) 2.76 0.0 0.0
GO:0009902 chloroplast relocation 10.13% (8/79) 4.76 0.0 0.0
GO:0051667 establishment of plastid localization 10.13% (8/79) 4.76 0.0 0.0
GO:0051644 plastid localization 10.13% (8/79) 4.75 0.0 0.0
GO:0019750 chloroplast localization 10.13% (8/79) 4.75 0.0 0.0
GO:0051656 establishment of organelle localization 10.13% (8/79) 4.72 0.0 0.0
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 12.66% (10/79) 3.94 0.0 0.0
GO:0019682 glyceraldehyde-3-phosphate metabolic process 12.66% (10/79) 3.94 0.0 0.0
GO:0009240 isopentenyl diphosphate biosynthetic process 12.66% (10/79) 3.92 0.0 0.0
GO:0046490 isopentenyl diphosphate metabolic process 12.66% (10/79) 3.92 0.0 0.0
GO:0006996 organelle organization 24.05% (19/79) 2.38 0.0 0.0
GO:0048856 anatomical structure development 27.85% (22/79) 2.09 0.0 0.0
GO:0000023 maltose metabolic process 10.13% (8/79) 4.2 0.0 0.0
GO:0008654 phospholipid biosynthetic process 13.92% (11/79) 3.31 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 22.78% (18/79) 2.3 0.0 0.0
GO:0006644 phospholipid metabolic process 13.92% (11/79) 3.24 0.0 0.0
GO:0006655 phosphatidylglycerol biosynthetic process 7.59% (6/79) 5.06 0.0 0.0
GO:0046471 phosphatidylglycerol metabolic process 7.59% (6/79) 5.04 0.0 0.0
GO:0006081 cellular aldehyde metabolic process 12.66% (10/79) 3.42 0.0 0.0
GO:0043436 oxoacid metabolic process 26.58% (21/79) 1.99 0.0 0.0
GO:0003006 developmental process involved in reproduction 26.58% (21/79) 1.98 0.0 0.0
GO:0006351 transcription, DNA-templated 10.13% (8/79) 3.99 0.0 0.0
GO:0051640 organelle localization 10.13% (8/79) 3.99 0.0 0.0
GO:0097659 nucleic acid-templated transcription 10.13% (8/79) 3.99 0.0 0.0
GO:0044249 cellular biosynthetic process 36.71% (29/79) 1.53 0.0 0.0
GO:0006082 organic acid metabolic process 26.58% (21/79) 1.95 0.0 1e-06
GO:0019252 starch biosynthetic process 10.13% (8/79) 3.9 0.0 1e-06
GO:0005984 disaccharide metabolic process 10.13% (8/79) 3.86 0.0 1e-06
GO:1901259 chloroplast rRNA processing 3.8% (3/79) 8.04 0.0 1e-06
GO:0006790 sulfur compound metabolic process 16.46% (13/79) 2.69 0.0 1e-06
GO:0009570 chloroplast stroma 15.19% (12/79) 2.83 0.0 1e-06
GO:0009532 plastid stroma 15.19% (12/79) 2.83 0.0 1e-06
GO:0009059 macromolecule biosynthetic process 22.78% (18/79) 2.11 0.0 1e-06
GO:0140101 catalytic activity, acting on a tRNA 7.59% (6/79) 4.71 0.0 1e-06
GO:0009250 glucan biosynthetic process 11.39% (9/79) 3.48 0.0 1e-06
GO:0009311 oligosaccharide metabolic process 10.13% (8/79) 3.74 0.0 1e-06
GO:0043039 tRNA aminoacylation 6.33% (5/79) 5.22 0.0 2e-06
GO:0043038 amino acid activation 6.33% (5/79) 5.22 0.0 2e-06
GO:0006418 tRNA aminoacylation for protein translation 6.33% (5/79) 5.22 0.0 2e-06
GO:0005982 starch metabolic process 10.13% (8/79) 3.63 0.0 2e-06
GO:0006090 pyruvate metabolic process 12.66% (10/79) 3.08 0.0 2e-06
GO:0019752 carboxylic acid metabolic process 24.05% (19/79) 1.93 0.0 3e-06
GO:1901576 organic substance biosynthetic process 36.71% (29/79) 1.38 0.0 4e-06
GO:0051649 establishment of localization in cell 18.99% (15/79) 2.24 1e-06 4e-06
GO:0022414 reproductive process 26.58% (21/79) 1.72 1e-06 6e-06
GO:0009058 biosynthetic process 36.71% (29/79) 1.34 1e-06 7e-06
GO:0006073 cellular glucan metabolic process 11.39% (9/79) 3.08 1e-06 9e-06
GO:0044042 glucan metabolic process 11.39% (9/79) 3.08 1e-06 9e-06
GO:0043231 intracellular membrane-bounded organelle 84.81% (67/79) 0.5 2e-06 1.2e-05
GO:0051641 cellular localization 18.99% (15/79) 2.11 2e-06 1.2e-05
GO:0043227 membrane-bounded organelle 84.81% (67/79) 0.5 2e-06 1.2e-05
GO:0032774 RNA biosynthetic process 10.13% (8/79) 3.21 2e-06 1.8e-05
GO:1901135 carbohydrate derivative metabolic process 17.72% (14/79) 2.16 3e-06 1.8e-05
GO:0043229 intracellular organelle 84.81% (67/79) 0.48 3e-06 2e-05
GO:0043226 organelle 84.81% (67/79) 0.48 3e-06 2e-05
GO:0032501 multicellular organismal process 22.78% (18/79) 1.78 3e-06 2.3e-05
GO:0000373 Group II intron splicing 3.8% (3/79) 6.58 4e-06 2.5e-05
GO:0048481 plant ovule development 7.59% (6/79) 3.8 5e-06 3.3e-05
GO:0022607 cellular component assembly 13.92% (11/79) 2.43 6e-06 3.9e-05
GO:0032502 developmental process 31.65% (25/79) 1.33 7e-06 4.8e-05
GO:0090407 organophosphate biosynthetic process 13.92% (11/79) 2.39 8e-06 5.1e-05
GO:0033692 cellular polysaccharide biosynthetic process 11.39% (9/79) 2.73 9e-06 5.6e-05
GO:0019438 aromatic compound biosynthetic process 17.72% (14/79) 1.98 1e-05 6.3e-05
GO:0044281 small molecule metabolic process 26.58% (21/79) 1.49 1e-05 6.3e-05
GO:0004812 aminoacyl-tRNA ligase activity 5.06% (4/79) 4.9 1e-05 6.4e-05
GO:0016875 ligase activity, forming carbon-oxygen bonds 5.06% (4/79) 4.9 1e-05 6.4e-05
GO:0008610 lipid biosynthetic process 16.46% (13/79) 2.09 1e-05 6.5e-05
GO:0008150 biological_process 93.67% (74/79) 0.33 1.1e-05 6.6e-05
GO:0009295 nucleoid 5.06% (4/79) 4.87 1.1e-05 6.7e-05
GO:0046474 glycerophospholipid biosynthetic process 7.59% (6/79) 3.57 1.2e-05 7.3e-05
GO:0016874 ligase activity 7.59% (6/79) 3.53 1.4e-05 8.4e-05
GO:0034637 cellular carbohydrate biosynthetic process 11.39% (9/79) 2.63 1.5e-05 9e-05
GO:0006650 glycerophospholipid metabolic process 7.59% (6/79) 3.5 1.6e-05 9.4e-05
GO:0045017 glycerolipid biosynthetic process 7.59% (6/79) 3.45 1.9e-05 0.000111
GO:0019637 organophosphate metabolic process 16.46% (13/79) 2.0 2e-05 0.000115
GO:0004519 endonuclease activity 5.06% (4/79) 4.62 2.2e-05 0.000126
GO:0044255 cellular lipid metabolic process 16.46% (13/79) 1.98 2.2e-05 0.000126
GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 2.53% (2/79) 7.87 2.4e-05 0.000134
GO:1903725 regulation of phospholipid metabolic process 2.53% (2/79) 7.87 2.4e-05 0.000134
GO:0010239 chloroplast mRNA processing 2.53% (2/79) 7.87 2.4e-05 0.000134
GO:0071071 regulation of phospholipid biosynthetic process 2.53% (2/79) 7.87 2.4e-05 0.000134
GO:0046486 glycerolipid metabolic process 7.59% (6/79) 3.35 2.8e-05 0.000155
GO:0005739 mitochondrion 29.11% (23/79) 1.29 3.2e-05 0.000173
GO:0000271 polysaccharide biosynthetic process 11.39% (9/79) 2.48 3.3e-05 0.000177
GO:0044264 cellular polysaccharide metabolic process 11.39% (9/79) 2.48 3.4e-05 0.000183
GO:0007005 mitochondrion organization 3.8% (3/79) 5.45 4.3e-05 0.000232
GO:0004518 nuclease activity 6.33% (5/79) 3.69 4.5e-05 0.000238
GO:0006424 glutamyl-tRNA aminoacylation 2.53% (2/79) 7.45 4.8e-05 0.000253
GO:0043412 macromolecule modification 20.25% (16/79) 1.6 5.5e-05 0.000287
GO:0072594 establishment of protein localization to organelle 10.13% (8/79) 2.58 5.7e-05 0.000294
GO:0004540 ribonuclease activity 5.06% (4/79) 4.26 5.8e-05 0.000297
GO:0033365 protein localization to organelle 10.13% (8/79) 2.57 6e-05 0.000303
GO:0010557 positive regulation of macromolecule biosynthetic process 10.13% (8/79) 2.55 6.6e-05 0.000334
GO:1901362 organic cyclic compound biosynthetic process 17.72% (14/79) 1.72 7.2e-05 0.000363
GO:0031328 positive regulation of cellular biosynthetic process 10.13% (8/79) 2.53 7.3e-05 0.000364
GO:0051173 positive regulation of nitrogen compound metabolic process 10.13% (8/79) 2.53 7.4e-05 0.000367
GO:0031897 Tic complex 2.53% (2/79) 7.13 8e-05 0.000394
GO:0010604 positive regulation of macromolecule metabolic process 10.13% (8/79) 2.49 8.8e-05 0.000428
GO:0044262 cellular carbohydrate metabolic process 11.39% (9/79) 2.29 9.3e-05 0.00045
GO:0031325 positive regulation of cellular metabolic process 10.13% (8/79) 2.48 9.5e-05 0.000459
GO:0005976 polysaccharide metabolic process 11.39% (9/79) 2.26 0.000107 0.00051
GO:0006520 cellular amino acid metabolic process 11.39% (9/79) 2.26 0.000109 0.000519
GO:0017111 nucleoside-triphosphatase activity 6.33% (5/79) 3.27 0.000173 0.000816
GO:0004521 endoribonuclease activity 3.8% (3/79) 4.68 0.000221 0.001035
GO:0006796 phosphate-containing compound metabolic process 17.72% (14/79) 1.57 0.000224 0.001042
GO:0006629 lipid metabolic process 16.46% (13/79) 1.64 0.000232 0.001072
GO:0006793 phosphorus metabolic process 17.72% (14/79) 1.55 0.000257 0.001177
GO:0009891 positive regulation of biosynthetic process 10.13% (8/79) 2.26 0.00027 0.00123
GO:0010497 plasmodesmata-mediated intercellular transport 2.53% (2/79) 6.28 0.000286 0.001296
GO:1902680 positive regulation of RNA biosynthetic process 8.86% (7/79) 2.44 0.000309 0.001362
GO:1903508 positive regulation of nucleic acid-templated transcription 8.86% (7/79) 2.44 0.000309 0.001362
GO:0051254 positive regulation of RNA metabolic process 8.86% (7/79) 2.44 0.000309 0.001362
GO:0045893 positive regulation of transcription, DNA-templated 8.86% (7/79) 2.44 0.000309 0.001362
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 8.86% (7/79) 2.43 0.00033 0.001447
GO:0034654 nucleobase-containing compound biosynthetic process 10.13% (8/79) 2.21 0.000338 0.001462
GO:0016462 pyrophosphatase activity 6.33% (5/79) 3.07 0.000336 0.001465
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.33% (5/79) 3.06 0.000344 0.001479
GO:0009893 positive regulation of metabolic process 10.13% (8/79) 2.19 0.000373 0.001592
GO:0016817 hydrolase activity, acting on acid anhydrides 6.33% (5/79) 3.03 0.000375 0.001592
GO:0010496 intercellular transport 2.53% (2/79) 5.99 0.000436 0.001828
GO:0019747 regulation of isoprenoid metabolic process 2.53% (2/79) 5.99 0.000436 0.001828
GO:0018130 heterocycle biosynthetic process 12.66% (10/79) 1.83 0.000492 0.002053
GO:0044260 cellular macromolecule metabolic process 26.58% (21/79) 1.09 0.000515 0.002136
GO:0003724 RNA helicase activity 2.53% (2/79) 5.87 0.000522 0.002138
GO:0008186 ATP-dependent activity, acting on RNA 2.53% (2/79) 5.87 0.000522 0.002138
GO:0016051 carbohydrate biosynthetic process 11.39% (9/79) 1.93 0.000591 0.002405
GO:0090626 plant epidermis morphogenesis 5.06% (4/79) 3.32 0.000704 0.002834
GO:0010103 stomatal complex morphogenesis 5.06% (4/79) 3.32 0.000704 0.002834
GO:0004386 helicase activity 3.8% (3/79) 4.06 0.000788 0.00315
GO:0048522 positive regulation of cellular process 10.13% (8/79) 2.01 0.000822 0.00327
GO:0009941 chloroplast envelope 8.86% (7/79) 2.19 0.000859 0.003398
GO:0009526 plastid envelope 8.86% (7/79) 2.18 0.000907 0.003566
GO:0045037 protein import into chloroplast stroma 2.53% (2/79) 5.45 0.000942 0.003683
GO:0009508 plastid chromosome 2.53% (2/79) 5.28 0.001197 0.004652
GO:0006605 protein targeting 10.13% (8/79) 1.91 0.001294 0.005003
GO:0010020 chloroplast fission 2.53% (2/79) 5.2 0.001335 0.005131
GO:0031969 chloroplast membrane 3.8% (3/79) 3.77 0.00141 0.005388
GO:0043572 plastid fission 2.53% (2/79) 5.13 0.001481 0.005628
GO:0035639 purine ribonucleoside triphosphate binding 8.86% (7/79) 2.04 0.001598 0.006039
GO:0006098 pentose-phosphate shunt 5.06% (4/79) 2.99 0.001643 0.006176
GO:0031975 envelope 8.86% (7/79) 2.03 0.001675 0.006229
GO:0031967 organelle envelope 8.86% (7/79) 2.03 0.001675 0.006229
GO:0010675 regulation of cellular carbohydrate metabolic process 2.53% (2/79) 4.99 0.001793 0.006598
GO:0017076 purine nucleotide binding 8.86% (7/79) 2.01 0.001805 0.006606
GO:0032555 purine ribonucleotide binding 8.86% (7/79) 2.01 0.001788 0.006615
GO:0051156 glucose 6-phosphate metabolic process 5.06% (4/79) 2.94 0.001857 0.006758
GO:0006740 NADPH regeneration 5.06% (4/79) 2.94 0.001894 0.006822
GO:0032553 ribonucleotide binding 8.86% (7/79) 1.99 0.00189 0.006844
GO:0046890 regulation of lipid biosynthetic process 2.53% (2/79) 4.93 0.001961 0.007026
GO:0006739 NADP metabolic process 5.06% (4/79) 2.91 0.002009 0.007163
GO:0097367 carbohydrate derivative binding 8.86% (7/79) 1.97 0.00207 0.00734
GO:0099402 plant organ development 8.86% (7/79) 1.97 0.002107 0.007435
GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters 2.53% (2/79) 4.87 0.002135 0.007494
GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 2.53% (2/79) 4.81 0.002316 0.008089
GO:0051234 establishment of localization 21.52% (17/79) 1.07 0.002401 0.008343
GO:0051174 regulation of phosphorus metabolic process 5.06% (4/79) 2.84 0.002429 0.008356
GO:0019220 regulation of phosphate metabolic process 5.06% (4/79) 2.84 0.002429 0.008356
GO:0009073 aromatic amino acid family biosynthetic process 3.8% (3/79) 3.48 0.002495 0.00854
GO:0044271 cellular nitrogen compound biosynthetic process 12.66% (10/79) 1.51 0.002575 0.00877
GO:0034613 cellular protein localization 10.13% (8/79) 1.75 0.002597 0.008802
GO:0010677 negative regulation of cellular carbohydrate metabolic process 1.27% (1/79) 8.45 0.002857 0.009227
GO:0071072 negative regulation of phospholipid biosynthetic process 1.27% (1/79) 8.45 0.002857 0.009227
GO:0010323 negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 1.27% (1/79) 8.45 0.002857 0.009227
GO:0000376 RNA splicing, via transesterification reactions with guanosine as nucleophile 1.27% (1/79) 8.45 0.002857 0.009227
GO:1903726 negative regulation of phospholipid metabolic process 1.27% (1/79) 8.45 0.002857 0.009227
GO:0000372 Group I intron splicing 1.27% (1/79) 8.45 0.002857 0.009227
GO:0010494 cytoplasmic stress granule 1.27% (1/79) 8.45 0.002857 0.009227
GO:0042407 cristae formation 1.27% (1/79) 8.45 0.002857 0.009227
GO:1901265 nucleoside phosphate binding 10.13% (8/79) 1.73 0.002814 0.009445
GO:0000166 nucleotide binding 10.13% (8/79) 1.73 0.002814 0.009445
GO:0043168 anion binding 8.86% (7/79) 1.88 0.002973 0.009559
GO:1901363 heterocyclic compound binding 21.52% (17/79) 1.03 0.003225 0.010321
GO:0070727 cellular macromolecule localization 10.13% (8/79) 1.69 0.003361 0.010705
GO:0097159 organic cyclic compound binding 21.52% (17/79) 1.02 0.00345 0.010938
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 3.8% (3/79) 3.31 0.003504 0.011007
GO:0000375 RNA splicing, via transesterification reactions 3.8% (3/79) 3.31 0.003504 0.011007
GO:0003723 RNA binding 7.59% (6/79) 2.03 0.003543 0.01108
GO:0048518 positive regulation of biological process 10.13% (8/79) 1.66 0.003752 0.01168
GO:0032787 monocarboxylic acid metabolic process 12.66% (10/79) 1.43 0.003844 0.011912
GO:0006886 intracellular protein transport 10.13% (8/79) 1.64 0.004068 0.012549
GO:0051179 localization 21.52% (17/79) 0.97 0.004956 0.015221
GO:0045184 establishment of protein localization 10.13% (8/79) 1.58 0.005338 0.016178
GO:0015031 protein transport 10.13% (8/79) 1.58 0.005338 0.016178
GO:0006109 regulation of carbohydrate metabolic process 2.53% (2/79) 4.2 0.005299 0.016203
GO:0008104 protein localization 10.13% (8/79) 1.56 0.005716 0.016251
GO:0006421 asparaginyl-tRNA aminoacylation 1.27% (1/79) 7.45 0.005705 0.016287
GO:0004816 asparagine-tRNA ligase activity 1.27% (1/79) 7.45 0.005705 0.016287
GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity 1.27% (1/79) 7.45 0.005705 0.016287
GO:0006264 mitochondrial DNA replication 1.27% (1/79) 7.45 0.005705 0.016287
GO:0004654 polyribonucleotide nucleotidyltransferase activity 1.27% (1/79) 7.45 0.005705 0.016287
GO:0004818 glutamate-tRNA ligase activity 1.27% (1/79) 7.45 0.005705 0.016287
GO:0004828 serine-tRNA ligase activity 1.27% (1/79) 7.45 0.005705 0.016287
GO:0006434 seryl-tRNA aminoacylation 1.27% (1/79) 7.45 0.005705 0.016287
GO:0033258 plastid DNA metabolic process 1.27% (1/79) 7.45 0.005705 0.016287
GO:0033259 plastid DNA replication 1.27% (1/79) 7.45 0.005705 0.016287
GO:0009663 plasmodesma organization 1.27% (1/79) 7.45 0.005705 0.016287
GO:0003824 catalytic activity 36.71% (29/79) 0.65 0.005577 0.016757
GO:0010565 regulation of cellular ketone metabolic process 2.53% (2/79) 4.17 0.005575 0.016824
GO:0006397 mRNA processing 3.8% (3/79) 3.06 0.005676 0.016978
GO:0005694 chromosome 2.53% (2/79) 4.03 0.006744 0.019095
GO:0009706 chloroplast inner membrane 2.53% (2/79) 3.99 0.007052 0.019804
GO:0003924 GTPase activity 2.53% (2/79) 3.99 0.007052 0.019804
GO:0016887 ATP hydrolysis activity 3.8% (3/79) 2.94 0.007148 0.019992
GO:0019216 regulation of lipid metabolic process 2.53% (2/79) 3.93 0.007687 0.021413
GO:0009528 plastid inner membrane 2.53% (2/79) 3.9 0.008014 0.022233
GO:0051246 regulation of protein metabolic process 5.06% (4/79) 2.33 0.008325 0.022912
GO:0033036 macromolecule localization 10.13% (8/79) 1.47 0.008293 0.022914
GO:0045827 negative regulation of isoprenoid metabolic process 1.27% (1/79) 6.87 0.008546 0.022967
GO:0009513 etioplast 1.27% (1/79) 6.87 0.008546 0.022967
GO:0004047 aminomethyltransferase activity 1.27% (1/79) 6.87 0.008546 0.022967
GO:0019156 isoamylase activity 1.27% (1/79) 6.87 0.008546 0.022967
GO:0004817 cysteine-tRNA ligase activity 1.27% (1/79) 6.87 0.008546 0.022967
GO:0006423 cysteinyl-tRNA aminoacylation 1.27% (1/79) 6.87 0.008546 0.022967
GO:0000272 polysaccharide catabolic process 2.53% (2/79) 3.84 0.008687 0.023164
GO:0046777 protein autophosphorylation 3.8% (3/79) 2.84 0.008666 0.023199
GO:0046907 intracellular transport 10.13% (8/79) 1.45 0.008772 0.023301
GO:0071554 cell wall organization or biogenesis 7.59% (6/79) 1.73 0.009457 0.025024
GO:0019001 guanyl nucleotide binding 3.8% (3/79) 2.74 0.010359 0.026997
GO:0032561 guanyl ribonucleotide binding 3.8% (3/79) 2.74 0.010359 0.026997
GO:0005525 GTP binding 3.8% (3/79) 2.74 0.010359 0.026997
GO:0062012 regulation of small molecule metabolic process 2.53% (2/79) 3.7 0.010474 0.027192
GO:0005975 carbohydrate metabolic process 11.39% (9/79) 1.31 0.010356 0.027298
GO:0090698 post-embryonic plant morphogenesis 5.06% (4/79) 2.23 0.01067 0.027597
GO:0051055 negative regulation of lipid biosynthetic process 1.27% (1/79) 6.45 0.011378 0.028993
GO:0007007 inner mitochondrial membrane organization 1.27% (1/79) 6.45 0.011378 0.028993
GO:0045833 negative regulation of lipid metabolic process 1.27% (1/79) 6.45 0.011378 0.028993
GO:0007006 mitochondrial membrane organization 1.27% (1/79) 6.45 0.011378 0.028993
GO:0110165 cellular anatomical entity 93.67% (74/79) 0.14 0.013469 0.034194
GO:0036094 small molecule binding 10.13% (8/79) 1.34 0.013585 0.034362
GO:0045912 negative regulation of carbohydrate metabolic process 1.27% (1/79) 6.13 0.014203 0.035276
GO:0019843 rRNA binding 1.27% (1/79) 6.13 0.014203 0.035276
GO:0046209 nitric oxide metabolic process 1.27% (1/79) 6.13 0.014203 0.035276
GO:0006809 nitric oxide biosynthetic process 1.27% (1/79) 6.13 0.014203 0.035276
GO:0004133 glycogen debranching enzyme activity 1.27% (1/79) 6.13 0.014203 0.035276
GO:0042546 cell wall biogenesis 3.8% (3/79) 2.54 0.014938 0.03697
GO:0016123 xanthophyll biosynthetic process 1.27% (1/79) 5.87 0.017019 0.041085
GO:0004161 dimethylallyltranstransferase activity 1.27% (1/79) 5.87 0.017019 0.041085
GO:2000896 amylopectin metabolic process 1.27% (1/79) 5.87 0.017019 0.041085
GO:0004526 ribonuclease P activity 1.27% (1/79) 5.87 0.017019 0.041085
GO:0010021 amylopectin biosynthetic process 1.27% (1/79) 5.87 0.017019 0.041085
GO:0010098 suspensor development 1.27% (1/79) 5.87 0.017019 0.041085
GO:0009965 leaf morphogenesis 3.8% (3/79) 2.48 0.016759 0.041327
GO:0016787 hydrolase activity 13.92% (11/79) 1.04 0.017551 0.042222
GO:1901566 organonitrogen compound biosynthetic process 11.39% (9/79) 1.16 0.019118 0.045831
GO:0016120 carotene biosynthetic process 1.27% (1/79) 5.64 0.019828 0.04704
GO:0045216 cell-cell junction organization 1.27% (1/79) 5.64 0.019828 0.04704
GO:0062014 negative regulation of small molecule metabolic process 1.27% (1/79) 5.64 0.019828 0.04704
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_23 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_40 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_76 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_79 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_86 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_101 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_102 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_121 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_139 0.034 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_160 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_183 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_185 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_194 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_220 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_221 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_226 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_232 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_247 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_252 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_257 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_262 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_28 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_70 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_71 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_103 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_112 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_156 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_165 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_16 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_51 0.091 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_61 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_71 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_77 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_97 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_112 0.058 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_119 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_138 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_163 0.044 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_222 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_51 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_99 0.181 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_103 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_170 0.045 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_223 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_239 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_248 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_267 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_278 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_2 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_90 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_119 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_136 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_150 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_154 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_179 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (79) (download table)

InterPro Domains

GO Terms

Family Terms