Coexpression cluster: Cluster_158 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005488 binding 47.37% (27/57) 1.37 1e-06 0.000112
GO:0003674 molecular_function 57.89% (33/57) 0.85 5e-05 0.003595
GO:0003676 nucleic acid binding 17.54% (10/57) 2.22 4.7e-05 0.005077
GO:0005515 protein binding 19.3% (11/57) 1.61 0.000793 0.034081
GO:0016570 histone modification 3.51% (2/57) 5.71 0.000647 0.034753
GO:0043170 macromolecule metabolic process 19.3% (11/57) 1.53 0.001246 0.038277
GO:0098732 macromolecule deacylation 1.75% (1/57) 7.41 0.005861 0.043456
GO:1902680 positive regulation of RNA biosynthetic process 1.75% (1/57) 7.41 0.005861 0.043456
GO:1903508 positive regulation of nucleic acid-templated transcription 1.75% (1/57) 7.41 0.005861 0.043456
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 1.75% (1/57) 7.41 0.005861 0.043456
GO:0006476 protein deacetylation 1.75% (1/57) 7.41 0.005861 0.043456
GO:0016575 histone deacetylation 1.75% (1/57) 7.41 0.005861 0.043456
GO:0035601 protein deacylation 1.75% (1/57) 7.41 0.005861 0.043456
GO:0030896 checkpoint clamp complex 1.75% (1/57) 7.41 0.005861 0.043456
GO:0051254 positive regulation of RNA metabolic process 1.75% (1/57) 7.41 0.005861 0.043456
GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity 1.75% (1/57) 7.41 0.005861 0.043456
GO:0045893 positive regulation of transcription, DNA-templated 1.75% (1/57) 7.41 0.005861 0.043456
GO:0051173 positive regulation of nitrogen compound metabolic process 1.75% (1/57) 6.83 0.00878 0.043898
GO:0010604 positive regulation of macromolecule metabolic process 1.75% (1/57) 6.83 0.00878 0.043898
GO:0070461 SAGA-type complex 1.75% (1/57) 6.83 0.00878 0.043898
GO:0031570 DNA integrity checkpoint signaling 1.75% (1/57) 6.83 0.00878 0.043898
GO:0042770 signal transduction in response to DNA damage 1.75% (1/57) 6.83 0.00878 0.043898
GO:0000077 DNA damage checkpoint signaling 1.75% (1/57) 6.83 0.00878 0.043898
GO:0048522 positive regulation of cellular process 1.75% (1/57) 6.83 0.00878 0.043898
GO:0009891 positive regulation of biosynthetic process 1.75% (1/57) 6.83 0.00878 0.043898
GO:0010557 positive regulation of macromolecule biosynthetic process 1.75% (1/57) 6.83 0.00878 0.043898
GO:0031325 positive regulation of cellular metabolic process 1.75% (1/57) 6.83 0.00878 0.043898
GO:0009893 positive regulation of metabolic process 1.75% (1/57) 6.83 0.00878 0.043898
GO:0031328 positive regulation of cellular biosynthetic process 1.75% (1/57) 6.83 0.00878 0.043898
GO:0016070 RNA metabolic process 8.77% (5/57) 2.64 0.00124 0.04443
GO:0045944 positive regulation of transcription by RNA polymerase II 1.75% (1/57) 8.41 0.002935 0.045073
GO:0032786 positive regulation of DNA-templated transcription, elongation 1.75% (1/57) 8.41 0.002935 0.045073
GO:0032784 regulation of DNA-templated transcription, elongation 1.75% (1/57) 8.41 0.002935 0.045073
GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter 1.75% (1/57) 8.41 0.002935 0.045073
GO:0034243 regulation of transcription elongation from RNA polymerase II promoter 1.75% (1/57) 8.41 0.002935 0.045073
GO:0004540 ribonuclease activity 3.51% (2/57) 5.02 0.001715 0.046083
GO:0032296 double-stranded RNA-specific ribonuclease activity 1.75% (1/57) 5.83 0.017483 0.046406
GO:1901987 regulation of cell cycle phase transition 1.75% (1/57) 5.83 0.017483 0.046406
GO:0004525 ribonuclease III activity 1.75% (1/57) 5.83 0.017483 0.046406
GO:0031248 protein acetyltransferase complex 1.75% (1/57) 5.83 0.017483 0.046406
GO:1902493 acetyltransferase complex 1.75% (1/57) 5.83 0.017483 0.046406
GO:0009889 regulation of biosynthetic process 5.26% (3/57) 2.54 0.014968 0.046638
GO:0031326 regulation of cellular biosynthetic process 5.26% (3/57) 2.54 0.014968 0.046638
GO:2000112 regulation of cellular macromolecule biosynthetic process 5.26% (3/57) 2.54 0.014968 0.046638
GO:0010556 regulation of macromolecule biosynthetic process 5.26% (3/57) 2.54 0.014968 0.046638
GO:0031323 regulation of cellular metabolic process 5.26% (3/57) 2.44 0.017819 0.046721
GO:0006139 nucleobase-containing compound metabolic process 8.77% (5/57) 1.94 0.009733 0.047561
GO:0065007 biological regulation 7.02% (4/57) 2.24 0.010226 0.047795
GO:0046483 heterocycle metabolic process 8.77% (5/57) 1.79 0.014646 0.048445
GO:0006725 cellular aromatic compound metabolic process 8.77% (5/57) 1.79 0.014646 0.048445
GO:0004518 nuclease activity 3.51% (2/57) 3.71 0.010215 0.048806
GO:0080090 regulation of primary metabolic process 5.26% (3/57) 2.47 0.01708 0.048963
GO:0051171 regulation of nitrogen compound metabolic process 5.26% (3/57) 2.47 0.01708 0.048963
GO:0043167 ion binding 17.54% (10/57) 1.09 0.017385 0.04918
GO:0010948 negative regulation of cell cycle process 1.75% (1/57) 6.41 0.011689 0.049278
GO:0045786 negative regulation of cell cycle 1.75% (1/57) 6.41 0.011689 0.049278
GO:0000075 cell cycle checkpoint signaling 1.75% (1/57) 6.41 0.011689 0.049278
GO:1901988 negative regulation of cell cycle phase transition 1.75% (1/57) 6.41 0.011689 0.049278
GO:0010468 regulation of gene expression 5.26% (3/57) 2.47 0.016837 0.04959
GO:0140640 catalytic activity, acting on a nucleic acid 5.26% (3/57) 2.47 0.016837 0.04959
GO:0016571 histone methylation 1.75% (1/57) 6.09 0.01459 0.049793
GO:0018022 peptidyl-lysine methylation 1.75% (1/57) 6.09 0.01459 0.049793
GO:0048518 positive regulation of biological process 1.75% (1/57) 6.09 0.01459 0.049793
GO:0000123 histone acetyltransferase complex 1.75% (1/57) 6.09 0.01459 0.049793
GO:0034968 histone lysine methylation 1.75% (1/57) 6.09 0.01459 0.049793
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_11 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_51 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_80 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_82 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_114 0.037 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_131 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_145 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_147 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_152 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_164 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_179 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_191 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_192 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_194 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_221 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_241 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_252 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_332 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_76 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_83 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_143 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_170 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_27 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_55 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_114 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_124 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_148 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_156 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_160 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_203 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_214 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_216 0.036 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_217 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_244 0.036 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_288 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_1 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_36 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_67 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_72 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_86 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_101 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_146 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_158 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_170 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_179 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_181 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (57) (download table)

InterPro Domains

GO Terms

Family Terms