Coexpression cluster: Cluster_169 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 29.31% (17/58) 2.96 0.0 0.0
GO:0005488 binding 53.45% (31/58) 1.54 0.0 0.0
GO:0097159 organic cyclic compound binding 36.21% (21/58) 1.82 0.0 6e-06
GO:1901363 heterocyclic compound binding 36.21% (21/58) 1.82 0.0 6e-06
GO:0003674 molecular_function 60.34% (35/58) 0.91 8e-06 0.000302
GO:0016043 cellular component organization 8.62% (5/58) 3.68 4.4e-05 0.001327
GO:0071840 cellular component organization or biogenesis 8.62% (5/58) 3.36 0.000125 0.003204
GO:0016071 mRNA metabolic process 5.17% (3/58) 4.76 0.000183 0.003634
GO:0005634 nucleus 6.9% (4/58) 3.83 0.000179 0.004
GO:0043227 membrane-bounded organelle 6.9% (4/58) 3.46 0.000484 0.007875
GO:0043231 intracellular membrane-bounded organelle 6.9% (4/58) 3.47 0.000469 0.008397
GO:0043414 macromolecule methylation 3.45% (2/58) 5.58 0.000779 0.011627
GO:0043226 organelle 8.62% (5/58) 2.46 0.002115 0.023663
GO:0080009 mRNA methylation 1.72% (1/58) 8.39 0.002986 0.024299
GO:0016556 mRNA modification 1.72% (1/58) 8.39 0.002986 0.024299
GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity 1.72% (1/58) 8.39 0.002986 0.024299
GO:0006480 N-terminal protein amino acid methylation 1.72% (1/58) 8.39 0.002986 0.024299
GO:0032259 methylation 3.45% (2/58) 5.0 0.001775 0.024438
GO:0043229 intracellular organelle 8.62% (5/58) 2.47 0.002085 0.024881
GO:0051276 chromosome organization 3.45% (2/58) 4.93 0.001949 0.024914
GO:0005515 protein binding 17.24% (10/58) 1.44 0.003261 0.025377
GO:0003723 RNA binding 6.9% (4/58) 2.81 0.002542 0.026762
GO:1990904 ribonucleoprotein complex 3.45% (2/58) 4.69 0.002721 0.027054
GO:0034622 cellular protein-containing complex assembly 3.45% (2/58) 4.43 0.003855 0.028755
GO:0006397 mRNA processing 3.45% (2/58) 4.39 0.004105 0.029389
GO:0090304 nucleic acid metabolic process 8.62% (5/58) 2.2 0.004571 0.031473
GO:0065003 protein-containing complex assembly 3.45% (2/58) 4.26 0.004896 0.032456
GO:0031365 N-terminal protein amino acid modification 1.72% (1/58) 7.39 0.005964 0.038128
GO:0140097 catalytic activity, acting on DNA 3.45% (2/58) 4.07 0.006357 0.039237
GO:0043933 protein-containing complex subunit organization 3.45% (2/58) 4.0 0.00699 0.041708
GO:0006996 organelle organization 3.45% (2/58) 3.93 0.007651 0.044178
GO:0120013 lipid transfer activity 1.72% (1/58) 6.8 0.008933 0.044417
GO:0120009 intermembrane lipid transfer 1.72% (1/58) 6.8 0.008933 0.044417
GO:0006376 mRNA splice site selection 1.72% (1/58) 6.8 0.008933 0.044417
GO:0003910 DNA ligase (ATP) activity 1.72% (1/58) 6.8 0.008933 0.044417
GO:0005685 U1 snRNP 1.72% (1/58) 6.8 0.008933 0.044417
GO:0022607 cellular component assembly 3.45% (2/58) 3.77 0.009421 0.045577
GO:0022618 ribonucleoprotein complex assembly 1.72% (1/58) 6.39 0.011893 0.048384
GO:0071826 ribonucleoprotein complex subunit organization 1.72% (1/58) 6.39 0.011893 0.048384
GO:0017056 structural constituent of nuclear pore 1.72% (1/58) 6.39 0.011893 0.048384
GO:0031124 mRNA 3'-end processing 1.72% (1/58) 6.39 0.011893 0.048384
GO:0003909 DNA ligase activity 1.72% (1/58) 6.39 0.011893 0.048384
GO:0005737 cytoplasm 3.45% (2/58) 3.69 0.010562 0.048477
GO:0006139 nucleobase-containing compound metabolic process 8.62% (5/58) 1.91 0.010456 0.049255
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_11 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_23 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_79 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_115 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_127 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_139 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_147 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_152 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_176 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_221 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_224 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_242 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_254 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_258 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_337 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_26 0.033 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_59 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_76 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_83 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_116 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_128 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_133 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_165 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_29 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_112 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_149 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_160 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_166 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_215 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_244 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_259 0.038 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_262 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_265 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_288 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_295 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_296 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_299 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_1 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_4 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_8 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_77 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_141 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_151 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_158 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (58) (download table)

InterPro Domains

GO Terms

Family Terms