Coexpression cluster: Cluster_59 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006260 DNA replication 10.2% (10/98) 6.43 0.0 0.0
GO:0006259 DNA metabolic process 10.2% (10/98) 4.31 0.0 0.0
GO:0003677 DNA binding 13.27% (13/98) 3.11 0.0 0.0
GO:0009059 macromolecule biosynthetic process 11.22% (11/98) 3.29 0.0 1e-06
GO:0034645 cellular macromolecule biosynthetic process 10.2% (10/98) 3.29 0.0 3e-06
GO:0044260 cellular macromolecule metabolic process 21.43% (21/98) 1.87 0.0 5e-06
GO:0006974 cellular response to DNA damage stimulus 6.12% (6/98) 4.2 1e-06 1.2e-05
GO:0033554 cellular response to stress 6.12% (6/98) 4.2 1e-06 1.2e-05
GO:0051716 cellular response to stimulus 6.12% (6/98) 4.2 1e-06 1.2e-05
GO:0006281 DNA repair 6.12% (6/98) 4.3 1e-06 1.4e-05
GO:0000808 origin recognition complex 3.06% (3/98) 7.09 1e-06 1.4e-05
GO:0090304 nucleic acid metabolic process 11.22% (11/98) 2.74 1e-06 1.5e-05
GO:0006950 response to stress 6.12% (6/98) 3.9 3e-06 4.1e-05
GO:0050896 response to stimulus 6.12% (6/98) 3.8 5e-06 5.6e-05
GO:0003887 DNA-directed DNA polymerase activity 3.06% (3/98) 6.09 9e-06 0.000103
GO:0043170 macromolecule metabolic process 21.43% (21/98) 1.5 1.1e-05 0.000115
GO:0044249 cellular biosynthetic process 12.24% (12/98) 2.21 1.1e-05 0.000118
GO:0006270 DNA replication initiation 3.06% (3/98) 5.92 1.3e-05 0.000128
GO:1901576 organic substance biosynthetic process 12.24% (12/98) 2.15 1.7e-05 0.00015
GO:0034061 DNA polymerase activity 3.06% (3/98) 5.76 1.9e-05 0.000164
GO:0005664 nuclear origin of replication recognition complex 2.04% (2/98) 7.5 3e-05 0.000247
GO:0009058 biosynthetic process 12.24% (12/98) 2.02 3.8e-05 0.0003
GO:0003676 nucleic acid binding 13.27% (13/98) 1.9 4.3e-05 0.000322
GO:0140097 catalytic activity, acting on DNA 4.08% (4/98) 4.25 5.6e-05 0.000401
GO:0006139 nucleobase-containing compound metabolic process 11.22% (11/98) 2.02 8.3e-05 0.000574
GO:0006725 cellular aromatic compound metabolic process 11.22% (11/98) 1.9 0.000169 0.001117
GO:0046483 heterocycle metabolic process 11.22% (11/98) 1.9 0.000177 0.001129
GO:1901360 organic cyclic compound metabolic process 11.22% (11/98) 1.86 0.000218 0.00134
GO:0005634 nucleus 5.1% (5/98) 3.18 0.000231 0.001369
GO:0044237 cellular metabolic process 21.43% (21/98) 1.19 0.000244 0.001401
GO:0016779 nucleotidyltransferase activity 4.08% (4/98) 3.59 0.000337 0.001869
GO:1901363 heterocyclic compound binding 20.41% (20/98) 1.13 0.000647 0.003179
GO:0097159 organic cyclic compound binding 20.41% (20/98) 1.13 0.000647 0.003179
GO:0043231 intracellular membrane-bounded organelle 5.1% (5/98) 2.87 0.000622 0.003343
GO:0043227 membrane-bounded organelle 5.1% (5/98) 2.86 0.000645 0.003362
GO:0034641 cellular nitrogen compound metabolic process 11.22% (11/98) 1.6 0.000995 0.004754
GO:0030983 mismatched DNA binding 2.04% (2/98) 5.33 0.00106 0.004929
GO:0071704 organic substance metabolic process 21.43% (21/98) 1.03 0.001117 0.005055
GO:0009987 cellular process 24.49% (24/98) 0.93 0.001159 0.005111
GO:0000166 nucleotide binding 14.29% (14/98) 1.31 0.001457 0.006111
GO:1901265 nucleoside phosphate binding 14.29% (14/98) 1.31 0.001457 0.006111
GO:0006298 mismatch repair 2.04% (2/98) 5.04 0.001608 0.006586
GO:0032559 adenyl ribonucleotide binding 12.24% (12/98) 1.41 0.001849 0.007067
GO:0005524 ATP binding 12.24% (12/98) 1.41 0.001775 0.007099
GO:0030554 adenyl nucleotide binding 12.24% (12/98) 1.4 0.001906 0.007127
GO:0140640 catalytic activity, acting on a nucleic acid 5.1% (5/98) 2.52 0.001835 0.007174
GO:0036094 small molecule binding 14.29% (14/98) 1.24 0.002311 0.008456
GO:0008152 metabolic process 21.43% (21/98) 0.9 0.003262 0.011689
GO:0003690 double-stranded DNA binding 2.04% (2/98) 4.33 0.004362 0.015313
GO:0035639 purine ribonucleoside triphosphate binding 12.24% (12/98) 1.23 0.004915 0.016907
GO:0032555 purine ribonucleotide binding 12.24% (12/98) 1.23 0.005084 0.017147
GO:0017076 purine nucleotide binding 12.24% (12/98) 1.22 0.005215 0.017248
GO:0032553 ribonucleotide binding 12.24% (12/98) 1.21 0.005575 0.017757
GO:0032299 ribonuclease H2 complex 1.02% (1/98) 7.5 0.005524 0.017927
GO:0097367 carbohydrate derivative binding 12.24% (12/98) 1.2 0.00581 0.018169
GO:0006269 DNA replication, synthesis of RNA primer 1.02% (1/98) 6.5 0.011018 0.032119
GO:0031390 Ctf18 RFC-like complex 1.02% (1/98) 6.5 0.011018 0.032119
GO:0003896 DNA primase activity 1.02% (1/98) 6.5 0.011018 0.032119
GO:0043168 anion binding 12.24% (12/98) 1.09 0.01069 0.032834
GO:0005488 binding 24.49% (24/98) 0.66 0.013269 0.038038
GO:0043226 organelle 5.1% (5/98) 1.82 0.013785 0.038241
GO:0043229 intracellular organelle 5.1% (5/98) 1.83 0.013573 0.038272
GO:0007064 mitotic sister chromatid cohesion 1.02% (1/98) 5.92 0.016481 0.044294
GO:0007062 sister chromatid cohesion 1.02% (1/98) 5.92 0.016481 0.044294
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_12 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_49 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_55 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_58 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_63 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_110 0.041 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_166 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_172 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_262 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_3 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_9 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_10 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_11 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_19 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_20 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_24 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_25 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_36 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_42 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_46 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_47 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_49 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_50 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_55 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_63 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_67 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_76 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_81 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_85 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_89 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_92 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_93 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_94 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_96 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_99 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_108 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_114 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_115 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_118 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_127 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_130 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_131 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_134 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_135 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_139 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_140 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_146 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_148 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_153 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_154 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_158 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_160 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_163 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_165 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_167 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_168 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_169 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_170 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_171 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_186 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_6 0.073 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_20 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_87 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_88 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_130 0.053 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_139 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_146 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_169 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_219 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_259 0.036 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_285 0.034 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_299 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_46 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_52 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_118 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_131 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_158 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_185 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (98) (download table)

InterPro Domains

GO Terms

Family Terms