Coexpression cluster: Cluster_131 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 51.14% (45/88) 0.93 1e-06 0.000286
GO:0003689 DNA clamp loader activity 3.41% (3/88) 6.43 4e-06 0.000415
GO:0005663 DNA replication factor C complex 3.41% (3/88) 6.43 4e-06 0.000415
GO:0016787 hydrolase activity 17.05% (15/88) 1.8 2.2e-05 0.001567
GO:0006260 DNA replication 4.55% (4/88) 4.38 4e-05 0.002264
GO:0008150 biological_process 32.95% (29/88) 1.03 7.6e-05 0.002376
GO:0043167 ion binding 20.45% (18/88) 1.39 0.000136 0.002396
GO:0003824 catalytic activity 30.68% (27/88) 1.05 0.000119 0.002406
GO:0036094 small molecule binding 17.05% (15/88) 1.58 0.000128 0.002412
GO:0140097 catalytic activity, acting on DNA 4.55% (4/88) 4.01 0.000112 0.002426
GO:0030554 adenyl nucleotide binding 14.77% (13/88) 1.76 0.000108 0.002549
GO:1901265 nucleoside phosphate binding 17.05% (15/88) 1.65 7.3e-05 0.002571
GO:0000166 nucleotide binding 17.05% (15/88) 1.65 7.3e-05 0.002571
GO:0032559 adenyl ribonucleotide binding 14.77% (13/88) 1.76 0.000106 0.002718
GO:0005524 ATP binding 14.77% (13/88) 1.78 9.7e-05 0.002728
GO:0005575 cellular_component 19.32% (17/88) 1.54 6.1e-05 0.002867
GO:0005488 binding 30.68% (27/88) 0.99 0.000252 0.004174
GO:0032553 ribonucleotide binding 14.77% (13/88) 1.58 0.000375 0.004807
GO:0035639 purine ribonucleoside triphosphate binding 14.77% (13/88) 1.61 0.000309 0.004839
GO:0017076 purine nucleotide binding 14.77% (13/88) 1.59 0.000344 0.004849
GO:0008094 ATP-dependent activity, acting on DNA 3.41% (3/88) 4.43 0.000363 0.004872
GO:0032555 purine ribonucleotide binding 14.77% (13/88) 1.6 0.000334 0.004958
GO:0097367 carbohydrate derivative binding 14.77% (13/88) 1.55 0.00044 0.0054
GO:0034968 histone lysine methylation 2.27% (2/88) 5.84 0.000518 0.005407
GO:0018022 peptidyl-lysine methylation 2.27% (2/88) 5.84 0.000518 0.005407
GO:0016571 histone methylation 2.27% (2/88) 5.84 0.000518 0.005407
GO:0140657 ATP-dependent activity 5.68% (5/88) 2.91 0.000538 0.005421
GO:0009987 cellular process 25.0% (22/88) 1.08 0.000482 0.005664
GO:0110165 cellular anatomical entity 14.77% (13/88) 1.46 0.000815 0.007661
GO:0043168 anion binding 14.77% (13/88) 1.46 0.000801 0.007791
GO:0006479 protein methylation 2.27% (2/88) 5.38 0.001008 0.008885
GO:0008213 protein alkylation 2.27% (2/88) 5.38 0.001008 0.008885
GO:0097159 organic cyclic compound binding 20.45% (18/88) 1.13 0.001119 0.009284
GO:1901363 heterocyclic compound binding 20.45% (18/88) 1.13 0.001119 0.009284
GO:0018205 peptidyl-lysine modification 2.27% (2/88) 5.26 0.001206 0.009451
GO:1901565 organonitrogen compound catabolic process 2.27% (2/88) 5.26 0.001206 0.009451
GO:0016570 histone modification 2.27% (2/88) 5.14 0.001422 0.009546
GO:0016278 lysine N-methyltransferase activity 2.27% (2/88) 5.14 0.001422 0.009546
GO:0018024 histone-lysine N-methyltransferase activity 2.27% (2/88) 5.14 0.001422 0.009546
GO:0016279 protein-lysine N-methyltransferase activity 2.27% (2/88) 5.14 0.001422 0.009546
GO:0042054 histone methyltransferase activity 2.27% (2/88) 5.14 0.001422 0.009546
GO:0008152 metabolic process 22.73% (20/88) 1.03 0.001346 0.010255
GO:0008276 protein methyltransferase activity 2.27% (2/88) 5.03 0.001654 0.010847
GO:0044237 cellular metabolic process 18.18% (16/88) 1.17 0.001727 0.011069
GO:0008170 N-methyltransferase activity 2.27% (2/88) 4.93 0.001903 0.011926
GO:0043414 macromolecule methylation 2.27% (2/88) 4.84 0.002169 0.013013
GO:0052689 carboxylic ester hydrolase activity 2.27% (2/88) 4.84 0.002169 0.013013
GO:0046700 heterocycle catabolic process 2.27% (2/88) 4.75 0.002451 0.013553
GO:0019439 aromatic compound catabolic process 2.27% (2/88) 4.75 0.002451 0.013553
GO:0043170 macromolecule metabolic process 15.91% (14/88) 1.21 0.002551 0.013834
GO:0071704 organic substance metabolic process 20.45% (18/88) 1.03 0.002436 0.01402
GO:0016887 ATP hydrolysis activity 4.55% (4/88) 2.84 0.002389 0.014033
GO:0044270 cellular nitrogen compound catabolic process 2.27% (2/88) 4.67 0.00275 0.014359
GO:1901361 organic cyclic compound catabolic process 2.27% (2/88) 4.67 0.00275 0.014359
GO:0140640 catalytic activity, acting on a nucleic acid 5.68% (5/88) 2.36 0.002994 0.01535
GO:1901658 glycosyl compound catabolic process 1.14% (1/88) 7.84 0.004361 0.017082
GO:0034656 nucleobase-containing small molecule catabolic process 1.14% (1/88) 7.84 0.004361 0.017082
GO:0046087 cytidine metabolic process 1.14% (1/88) 7.84 0.004361 0.017082
GO:0046135 pyrimidine nucleoside catabolic process 1.14% (1/88) 7.84 0.004361 0.017082
GO:0009164 nucleoside catabolic process 1.14% (1/88) 7.84 0.004361 0.017082
GO:0009119 ribonucleoside metabolic process 1.14% (1/88) 7.84 0.004361 0.017082
GO:0006213 pyrimidine nucleoside metabolic process 1.14% (1/88) 7.84 0.004361 0.017082
GO:0046131 pyrimidine ribonucleoside metabolic process 1.14% (1/88) 7.84 0.004361 0.017082
GO:0009972 cytidine deamination 1.14% (1/88) 7.84 0.004361 0.017082
GO:0046133 pyrimidine ribonucleoside catabolic process 1.14% (1/88) 7.84 0.004361 0.017082
GO:0006216 cytidine catabolic process 1.14% (1/88) 7.84 0.004361 0.017082
GO:0004126 cytidine deaminase activity 1.14% (1/88) 7.84 0.004361 0.017082
GO:0042454 ribonucleoside catabolic process 1.14% (1/88) 7.84 0.004361 0.017082
GO:0072529 pyrimidine-containing compound catabolic process 1.14% (1/88) 7.84 0.004361 0.017082
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 2.27% (2/88) 4.32 0.004483 0.017317
GO:0016462 pyrophosphatase activity 5.68% (5/88) 2.3 0.003478 0.017514
GO:0032259 methylation 2.27% (2/88) 4.2 0.005286 0.020143
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.68% (5/88) 2.25 0.004088 0.020223
GO:0016817 hydrolase activity, acting on acid anhydrides 5.68% (5/88) 2.23 0.004307 0.02094
GO:0016788 hydrolase activity, acting on ester bonds 4.55% (4/88) 2.37 0.007535 0.02833
GO:0004867 serine-type endopeptidase inhibitor activity 1.14% (1/88) 6.84 0.008704 0.031468
GO:0004425 indole-3-glycerol-phosphate synthase activity 1.14% (1/88) 6.84 0.008704 0.031468
GO:0009611 response to wounding 1.14% (1/88) 6.84 0.008704 0.031468
GO:0018193 peptidyl-amino acid modification 2.27% (2/88) 3.8 0.009095 0.032061
GO:0005634 nucleus 3.41% (3/88) 2.81 0.009049 0.032303
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.14% (1/88) 6.26 0.013028 0.039504
GO:0019239 deaminase activity 1.14% (1/88) 6.26 0.013028 0.039504
GO:0033015 tetrapyrrole catabolic process 1.14% (1/88) 6.26 0.013028 0.039504
GO:0006303 double-strand break repair via nonhomologous end joining 1.14% (1/88) 6.26 0.013028 0.039504
GO:1901136 carbohydrate derivative catabolic process 1.14% (1/88) 6.26 0.013028 0.039504
GO:0098533 ATPase dependent transmembrane transport complex 1.14% (1/88) 6.26 0.013028 0.039504
GO:0047746 chlorophyllase activity 1.14% (1/88) 6.26 0.013028 0.039504
GO:0046149 pigment catabolic process 1.14% (1/88) 6.26 0.013028 0.039504
GO:0006787 porphyrin-containing compound catabolic process 1.14% (1/88) 6.26 0.013028 0.039504
GO:0015996 chlorophyll catabolic process 1.14% (1/88) 6.26 0.013028 0.039504
GO:0009922 fatty acid elongase activity 1.14% (1/88) 6.26 0.013028 0.039504
GO:0043190 ATP-binding cassette (ABC) transporter complex 1.14% (1/88) 6.26 0.013028 0.039504
GO:0046983 protein dimerization activity 2.27% (2/88) 3.48 0.013811 0.041432
GO:0017111 nucleoside-triphosphatase activity 4.55% (4/88) 2.18 0.012027 0.041871
GO:0055085 transmembrane transport 5.68% (5/88) 1.8 0.014571 0.043254
GO:0043227 membrane-bounded organelle 3.41% (3/88) 2.46 0.017386 0.045822
GO:0043231 intracellular membrane-bounded organelle 3.41% (3/88) 2.46 0.017386 0.045822
GO:0044249 cellular biosynthetic process 6.82% (6/88) 1.57 0.015775 0.046338
GO:0030414 peptidase inhibitor activity 1.14% (1/88) 5.84 0.017333 0.046552
GO:0061134 peptidase regulator activity 1.14% (1/88) 5.84 0.017333 0.046552
GO:0004866 endopeptidase inhibitor activity 1.14% (1/88) 5.84 0.017333 0.046552
GO:0061135 endopeptidase regulator activity 1.14% (1/88) 5.84 0.017333 0.046552
GO:0008272 sulfate transport 1.14% (1/88) 5.84 0.017333 0.046552
GO:0015116 sulfate transmembrane transporter activity 1.14% (1/88) 5.84 0.017333 0.046552
GO:0004312 fatty acid synthase activity 1.14% (1/88) 5.84 0.017333 0.046552
GO:0072348 sulfur compound transport 1.14% (1/88) 5.84 0.017333 0.046552
GO:0008270 zinc ion binding 4.55% (4/88) 2.05 0.016211 0.047128
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_16 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_49 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_170 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_214 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_227 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_265 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_31 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_59 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_167 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_33 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_54 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_79 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_81 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_87 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_145 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_152 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_193 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_243 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_259 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_262 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_11 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_42 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_92 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_99 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_107 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_114 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_116 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_124 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_148 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_161 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_163 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (88) (download table)

InterPro Domains

GO Terms

Family Terms