Coexpression cluster: Cluster_122 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0033014 tetrapyrrole biosynthetic process 15.22% (7/46) 7.15 0.0 0.0
GO:0033013 tetrapyrrole metabolic process 15.22% (7/46) 6.94 0.0 0.0
GO:0006779 porphyrin-containing compound biosynthetic process 8.7% (4/46) 7.59 0.0 0.0
GO:0006778 porphyrin-containing compound metabolic process 8.7% (4/46) 7.27 0.0 0.0
GO:0004853 uroporphyrinogen decarboxylase activity 6.52% (3/46) 8.59 0.0 1e-06
GO:0003824 catalytic activity 45.65% (21/46) 1.65 0.0 1.4e-05
GO:0019438 aromatic compound biosynthetic process 15.22% (7/46) 3.57 2e-06 4.4e-05
GO:1901566 organonitrogen compound biosynthetic process 15.22% (7/46) 3.58 2e-06 4.6e-05
GO:0018130 heterocycle biosynthetic process 15.22% (7/46) 3.52 2e-06 4.8e-05
GO:1901362 organic cyclic compound biosynthetic process 15.22% (7/46) 3.46 3e-06 5.8e-05
GO:0003674 molecular_function 58.7% (27/46) 1.1 8e-06 0.000117
GO:1901360 organic cyclic compound metabolic process 19.57% (9/46) 2.66 1e-05 0.000121
GO:0016831 carboxy-lyase activity 6.52% (3/46) 6.18 9e-06 0.000122
GO:0046483 heterocycle metabolic process 19.57% (9/46) 2.7 8e-06 0.000125
GO:0006725 cellular aromatic compound metabolic process 19.57% (9/46) 2.71 8e-06 0.00013
GO:0044249 cellular biosynthetic process 17.39% (8/46) 2.71 2.5e-05 0.000298
GO:0016830 carbon-carbon lyase activity 6.52% (3/46) 5.65 2.8e-05 0.000313
GO:0044271 cellular nitrogen compound biosynthetic process 15.22% (7/46) 2.91 3.5e-05 0.000351
GO:1901576 organic substance biosynthetic process 17.39% (8/46) 2.65 3.4e-05 0.000357
GO:0034641 cellular nitrogen compound metabolic process 19.57% (9/46) 2.4 4e-05 0.000382
GO:0009058 biosynthetic process 17.39% (8/46) 2.53 6.2e-05 0.000561
GO:0044237 cellular metabolic process 28.26% (13/46) 1.59 0.000217 0.001885
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 4.35% (2/46) 5.68 0.000676 0.005613
GO:1901564 organonitrogen compound metabolic process 21.74% (10/46) 1.68 0.000853 0.006789
GO:0016829 lyase activity 8.7% (4/46) 3.2 0.000929 0.007095
GO:0016874 ligase activity 6.52% (3/46) 3.93 0.001005 0.00738
GO:0008152 metabolic process 28.26% (13/46) 1.3 0.001503 0.01063
GO:0004329 formate-tetrahydrofolate ligase activity 2.17% (1/46) 8.59 0.002593 0.012381
GO:0046406 magnesium protoporphyrin IX methyltransferase activity 2.17% (1/46) 8.59 0.002593 0.012381
GO:0016851 magnesium chelatase activity 2.17% (1/46) 8.59 0.002593 0.012381
GO:0015995 chlorophyll biosynthetic process 2.17% (1/46) 8.59 0.002593 0.012381
GO:0015994 chlorophyll metabolic process 2.17% (1/46) 8.59 0.002593 0.012381
GO:0051002 ligase activity, forming nitrogen-metal bonds 2.17% (1/46) 8.59 0.002593 0.012381
GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes 2.17% (1/46) 8.59 0.002593 0.012381
GO:0008883 glutamyl-tRNA reductase activity 2.17% (1/46) 8.59 0.002593 0.012381
GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity 2.17% (1/46) 8.59 0.002593 0.012381
GO:0004655 porphobilinogen synthase activity 2.17% (1/46) 8.59 0.002593 0.012381
GO:0016744 transketolase or transaldolase activity 2.17% (1/46) 8.59 0.002593 0.012381
GO:0071704 organic substance metabolic process 26.09% (12/46) 1.31 0.002262 0.015429
GO:0006091 generation of precursor metabolites and energy 4.35% (2/46) 4.78 0.002382 0.015686
GO:0009987 cellular process 28.26% (13/46) 1.14 0.004104 0.019119
GO:0009052 pentose-phosphate shunt, non-oxidative branch 2.17% (1/46) 7.59 0.005179 0.021505
GO:0004751 ribose-5-phosphate isomerase activity 2.17% (1/46) 7.59 0.005179 0.021505
GO:0070567 cytidylyltransferase activity 2.17% (1/46) 7.59 0.005179 0.021505
GO:0004418 hydroxymethylbilane synthase activity 2.17% (1/46) 7.59 0.005179 0.021505
GO:0004618 phosphoglycerate kinase activity 2.17% (1/46) 7.59 0.005179 0.021505
GO:0140597 protein carrier chaperone 2.17% (1/46) 7.01 0.007759 0.029058
GO:0032977 membrane insertase activity 2.17% (1/46) 7.01 0.007759 0.029058
GO:0016114 terpenoid biosynthetic process 2.17% (1/46) 7.01 0.007759 0.029058
GO:0006721 terpenoid metabolic process 2.17% (1/46) 7.01 0.007759 0.029058
GO:0140101 catalytic activity, acting on a tRNA 4.35% (2/46) 3.89 0.008031 0.0295
GO:0006807 nitrogen compound metabolic process 21.74% (10/46) 1.26 0.007326 0.029773
GO:0016774 phosphotransferase activity, carboxyl group as acceptor 2.17% (1/46) 6.59 0.010332 0.037234
GO:0140104 molecular carrier activity 2.17% (1/46) 6.27 0.012899 0.044794
GO:0046148 pigment biosynthetic process 2.17% (1/46) 6.27 0.012899 0.044794
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_98 0.043 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_106 0.048 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_135 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_151 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_185 0.065 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_227 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_7 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_11 0.114 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_14 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_112 0.046 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_149 0.048 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_51 0.034 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_69 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_99 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_103 0.118 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_170 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_177 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_193 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_205 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_231 0.063 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_267 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_38 0.067 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_66 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_118 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_129 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_137 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (46) (download table)

InterPro Domains

GO Terms

Family Terms