Coexpression cluster: Cluster_103 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043043 peptide biosynthetic process 40.35% (23/57) 5.61 0.0 0.0
GO:0043604 amide biosynthetic process 40.35% (23/57) 5.6 0.0 0.0
GO:0006518 peptide metabolic process 40.35% (23/57) 5.58 0.0 0.0
GO:0003735 structural constituent of ribosome 40.35% (23/57) 5.63 0.0 0.0
GO:0005840 ribosome 40.35% (23/57) 5.66 0.0 0.0
GO:0043603 cellular amide metabolic process 40.35% (23/57) 5.54 0.0 0.0
GO:0005198 structural molecule activity 40.35% (23/57) 5.47 0.0 0.0
GO:0043228 non-membrane-bounded organelle 40.35% (23/57) 5.42 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 40.35% (23/57) 5.42 0.0 0.0
GO:0006412 translation 38.6% (22/57) 5.59 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 43.86% (25/57) 4.97 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 43.86% (25/57) 4.76 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 40.35% (23/57) 4.94 0.0 0.0
GO:0009059 macromolecule biosynthetic process 40.35% (23/57) 4.8 0.0 0.0
GO:0043229 intracellular organelle 40.35% (23/57) 4.69 0.0 0.0
GO:0043226 organelle 40.35% (23/57) 4.69 0.0 0.0
GO:0044249 cellular biosynthetic process 43.86% (25/57) 4.21 0.0 0.0
GO:1901576 organic substance biosynthetic process 43.86% (25/57) 4.13 0.0 0.0
GO:0009058 biosynthetic process 43.86% (25/57) 3.97 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 43.86% (25/57) 3.7 0.0 0.0
GO:0044267 cellular protein metabolic process 38.6% (22/57) 3.44 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 43.86% (25/57) 2.98 0.0 0.0
GO:0019538 protein metabolic process 38.6% (22/57) 3.15 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 40.35% (23/57) 3.01 0.0 0.0
GO:0110165 cellular anatomical entity 43.86% (25/57) 2.77 0.0 0.0
GO:0044237 cellular metabolic process 45.61% (26/57) 2.49 0.0 0.0
GO:0006807 nitrogen compound metabolic process 43.86% (25/57) 2.57 0.0 0.0
GO:0005575 cellular_component 43.86% (25/57) 2.48 0.0 0.0
GO:0043170 macromolecule metabolic process 40.35% (23/57) 2.59 0.0 0.0
GO:0009987 cellular process 49.12% (28/57) 2.01 0.0 0.0
GO:0071704 organic substance metabolic process 43.86% (25/57) 2.17 0.0 0.0
GO:0008152 metabolic process 45.61% (26/57) 2.09 0.0 0.0
GO:0044238 primary metabolic process 38.6% (22/57) 2.08 0.0 0.0
GO:0008150 biological_process 49.12% (28/57) 1.48 0.0 0.0
GO:0003723 RNA binding 10.53% (6/57) 3.42 2e-05 6e-05
GO:0003674 molecular_function 56.14% (32/57) 0.81 0.000146 0.000425
GO:0019843 rRNA binding 3.51% (2/57) 5.61 0.000753 0.002137
GO:0004418 hydroxymethylbilane synthase activity 1.75% (1/57) 8.41 0.002935 0.00811
GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity 1.75% (1/57) 7.41 0.005861 0.013379
GO:0034312 diol biosynthetic process 1.75% (1/57) 7.41 0.005861 0.013379
GO:0034311 diol metabolic process 1.75% (1/57) 7.41 0.005861 0.013379
GO:0004784 superoxide dismutase activity 1.75% (1/57) 7.41 0.005861 0.013379
GO:0006729 tetrahydrobiopterin biosynthetic process 1.75% (1/57) 7.41 0.005861 0.013379
GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor 1.75% (1/57) 7.41 0.005861 0.013379
GO:0046146 tetrahydrobiopterin metabolic process 1.75% (1/57) 7.41 0.005861 0.013379
GO:0003676 nucleic acid binding 12.28% (7/57) 1.7 0.005399 0.014535
GO:0042559 pteridine-containing compound biosynthetic process 1.75% (1/57) 6.41 0.011689 0.02557
GO:0046173 polyol biosynthetic process 1.75% (1/57) 6.41 0.011689 0.02557
GO:0072593 reactive oxygen species metabolic process 1.75% (1/57) 6.09 0.01459 0.03064
GO:0006801 superoxide metabolic process 1.75% (1/57) 6.09 0.01459 0.03064
GO:0046165 alcohol biosynthetic process 1.75% (1/57) 5.83 0.017483 0.035995
GO:0042558 pteridine-containing compound metabolic process 1.75% (1/57) 5.61 0.020368 0.040351
GO:0006414 translational elongation 1.75% (1/57) 5.61 0.020368 0.040351
GO:0003746 translation elongation factor activity 1.75% (1/57) 5.41 0.023244 0.045197
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_43 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_98 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_185 0.067 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_227 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_27 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_80 0.347 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_103 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_59 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_51 0.215 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_58 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_68 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_103 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_118 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_145 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_152 0.037 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_170 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_171 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_205 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_38 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_66 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_90 0.042 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_125 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_127 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_174 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_178 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (57) (download table)

InterPro Domains

GO Terms

Family Terms