Coexpression cluster: Cluster_205 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016592 mediator complex 2.86% (2/70) 7.27 6.8e-05 0.003043
GO:0006357 regulation of transcription by RNA polymerase II 2.86% (2/70) 7.54 4.6e-05 0.004063
GO:0003712 transcription coregulator activity 2.86% (2/70) 6.4 0.000249 0.007387
GO:0140513 nuclear protein-containing complex 2.86% (2/70) 5.21 0.001332 0.029637
GO:0004518 nuclease activity 2.86% (2/70) 5.05 0.001671 0.029749
GO:0019222 regulation of metabolic process 2.86% (2/70) 3.75 0.009799 0.030073
GO:0060255 regulation of macromolecule metabolic process 2.86% (2/70) 3.77 0.009528 0.030286
GO:0031323 regulation of cellular metabolic process 2.86% (2/70) 3.77 0.009528 0.030286
GO:0051171 regulation of nitrogen compound metabolic process 2.86% (2/70) 3.81 0.008997 0.030796
GO:0009889 regulation of biosynthetic process 2.86% (2/70) 3.81 0.008997 0.030796
GO:0080090 regulation of primary metabolic process 2.86% (2/70) 3.81 0.008997 0.030796
GO:0010468 regulation of gene expression 2.86% (2/70) 3.81 0.008997 0.030796
GO:0031326 regulation of cellular biosynthetic process 2.86% (2/70) 3.81 0.008997 0.030796
GO:2000112 regulation of cellular macromolecule biosynthetic process 2.86% (2/70) 3.81 0.008997 0.030796
GO:0010556 regulation of macromolecule biosynthetic process 2.86% (2/70) 3.81 0.008997 0.030796
GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 1.43% (1/70) 6.27 0.012871 0.036953
GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters 1.43% (1/70) 6.27 0.012871 0.036953
GO:0051252 regulation of RNA metabolic process 2.86% (2/70) 3.83 0.008736 0.040922
GO:0019219 regulation of nucleobase-containing compound metabolic process 2.86% (2/70) 3.83 0.008736 0.040922
GO:1903506 regulation of nucleic acid-templated transcription 2.86% (2/70) 3.83 0.008736 0.040922
GO:0006355 regulation of transcription, DNA-templated 2.86% (2/70) 3.83 0.008736 0.040922
GO:2001141 regulation of RNA biosynthetic process 2.86% (2/70) 3.83 0.008736 0.040922
GO:0016788 hydrolase activity, acting on ester bonds 2.86% (2/70) 3.32 0.017286 0.043956
GO:0004427 inorganic diphosphatase activity 1.43% (1/70) 5.86 0.017125 0.044828
GO:0004521 endoribonuclease activity 1.43% (1/70) 5.86 0.017125 0.044828
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 1.43% (1/70) 5.86 0.017125 0.044828
GO:0006779 porphyrin-containing compound biosynthetic process 1.43% (1/70) 7.27 0.006456 0.047883
GO:0006778 porphyrin-containing compound metabolic process 1.43% (1/70) 7.27 0.006456 0.047883
GO:0004525 ribonuclease III activity 1.43% (1/70) 7.27 0.006456 0.047883
GO:0032296 double-stranded RNA-specific ribonuclease activity 1.43% (1/70) 7.27 0.006456 0.047883
GO:0004109 coproporphyrinogen oxidase activity 1.43% (1/70) 7.86 0.004309 0.047934
GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 1.43% (1/70) 7.86 0.004309 0.047934
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_10 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_34 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_90 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_135 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_176 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_185 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_214 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_247 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_258 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_259 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_37 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_63 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_65 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_82 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_109 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_122 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_156 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_11 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_17 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_42 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_61 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_63 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_74 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_84 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_103 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_117 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_120 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_150 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_70 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_101 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_109 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_170 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_262 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_14 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_38 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_79 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_118 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_125 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (70) (download table)

InterPro Domains

GO Terms

Family Terms