Coexpression cluster: Cluster_165 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006790 sulfur compound metabolic process 9.09% (5/55) 5.14 0.0 6.9e-05
GO:0016226 iron-sulfur cluster assembly 5.45% (3/55) 6.78 2e-06 0.000178
GO:0031163 metallo-sulfur cluster assembly 5.45% (3/55) 6.78 2e-06 0.000178
GO:0034641 cellular nitrogen compound metabolic process 18.18% (10/55) 2.41 1.5e-05 0.000865
GO:0009987 cellular process 32.73% (18/55) 1.46 3.8e-05 0.001782
GO:0006575 cellular modified amino acid metabolic process 5.45% (3/55) 5.2 7.4e-05 0.002479
GO:0008150 biological_process 38.18% (21/55) 1.24 6.7e-05 0.002635
GO:0044237 cellular metabolic process 25.45% (14/55) 1.65 9e-05 0.002658
GO:0042398 cellular modified amino acid biosynthetic process 3.64% (2/55) 6.93 0.000109 0.002838
GO:0008152 metabolic process 29.09% (16/55) 1.39 0.00022 0.005172
GO:0046483 heterocycle metabolic process 12.73% (7/55) 2.29 0.000534 0.009654
GO:0022607 cellular component assembly 5.45% (3/55) 4.32 0.000455 0.009716
GO:0006725 cellular aromatic compound metabolic process 12.73% (7/55) 2.3 0.000504 0.00988
GO:1901360 organic cyclic compound metabolic process 12.73% (7/55) 2.25 0.000617 0.010363
GO:0009262 deoxyribonucleotide metabolic process 1.82% (1/55) 8.52 0.002726 0.022878
GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor 1.82% (1/55) 8.52 0.002726 0.022878
GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity 1.82% (1/55) 8.52 0.002726 0.022878
GO:0009263 deoxyribonucleotide biosynthetic process 1.82% (1/55) 8.52 0.002726 0.022878
GO:0046654 tetrahydrofolate biosynthetic process 1.82% (1/55) 8.52 0.002726 0.022878
GO:0046653 tetrahydrofolate metabolic process 1.82% (1/55) 8.52 0.002726 0.022878
GO:0034227 tRNA thio-modification 1.82% (1/55) 8.52 0.002726 0.022878
GO:0006750 glutathione biosynthetic process 1.82% (1/55) 8.52 0.002726 0.022878
GO:0004146 dihydrofolate reductase activity 1.82% (1/55) 8.52 0.002726 0.022878
GO:0019184 nonribosomal peptide biosynthetic process 1.82% (1/55) 8.52 0.002726 0.022878
GO:0004363 glutathione synthase activity 1.82% (1/55) 8.52 0.002726 0.022878
GO:0006139 nucleobase-containing compound metabolic process 10.91% (6/55) 2.21 0.001802 0.026461
GO:0006749 glutathione metabolic process 3.64% (2/55) 5.0 0.001779 0.027874
GO:0009058 biosynthetic process 10.91% (6/55) 2.02 0.003505 0.028402
GO:0006396 RNA processing 5.45% (3/55) 3.28 0.003631 0.028442
GO:0097159 organic cyclic compound binding 21.82% (12/55) 1.23 0.004139 0.030393
GO:1901363 heterocyclic compound binding 21.82% (12/55) 1.23 0.004139 0.030393
GO:0003674 molecular_function 45.45% (25/55) 0.76 0.002236 0.030903
GO:0004807 triose-phosphate isomerase activity 1.82% (1/55) 7.52 0.005444 0.032806
GO:0009143 nucleoside triphosphate catabolic process 1.82% (1/55) 7.52 0.005444 0.032806
GO:0009396 folic acid-containing compound biosynthetic process 1.82% (1/55) 7.52 0.005444 0.032806
GO:0016843 amine-lyase activity 1.82% (1/55) 7.52 0.005444 0.032806
GO:0016844 strictosidine synthase activity 1.82% (1/55) 7.52 0.005444 0.032806
GO:0140098 catalytic activity, acting on RNA 5.45% (3/55) 3.12 0.005033 0.034788
GO:0016043 cellular component organization 5.45% (3/55) 3.13 0.004924 0.035063
GO:0044249 cellular biosynthetic process 9.09% (5/55) 1.99 0.008446 0.039697
GO:0006807 nitrogen compound metabolic process 18.18% (10/55) 1.23 0.00875 0.040318
GO:0044271 cellular nitrogen compound biosynthetic process 7.27% (4/55) 2.32 0.00841 0.040335
GO:0071840 cellular component organization or biogenesis 5.45% (3/55) 2.86 0.008259 0.040435
GO:0016725 oxidoreductase activity, acting on CH or CH2 groups 1.82% (1/55) 6.93 0.008156 0.040779
GO:0047429 nucleoside-triphosphate diphosphatase activity 1.82% (1/55) 6.93 0.008156 0.040779
GO:1901292 nucleoside phosphate catabolic process 1.82% (1/55) 6.93 0.008156 0.040779
GO:0003968 RNA-directed 5'-3' RNA polymerase activity 1.82% (1/55) 6.93 0.008156 0.040779
GO:0042559 pteridine-containing compound biosynthetic process 1.82% (1/55) 6.93 0.008156 0.040779
GO:0006760 folic acid-containing compound metabolic process 1.82% (1/55) 6.93 0.008156 0.040779
GO:0016881 acid-amino acid ligase activity 1.82% (1/55) 6.93 0.008156 0.040779
GO:0071704 organic substance metabolic process 21.82% (12/55) 1.13 0.007187 0.042223
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 1.82% (1/55) 6.52 0.01086 0.043255
GO:0032296 double-stranded RNA-specific ribonuclease activity 1.82% (1/55) 6.52 0.01086 0.043255
GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors 1.82% (1/55) 6.52 0.01086 0.043255
GO:0016840 carbon-nitrogen lyase activity 1.82% (1/55) 6.52 0.01086 0.043255
GO:0006721 terpenoid metabolic process 1.82% (1/55) 6.52 0.01086 0.043255
GO:0004525 ribonuclease III activity 1.82% (1/55) 6.52 0.01086 0.043255
GO:0016114 terpenoid biosynthetic process 1.82% (1/55) 6.52 0.01086 0.043255
GO:0004518 nuclease activity 3.64% (2/55) 3.64 0.011302 0.044265
GO:0006518 peptide metabolic process 5.45% (3/55) 2.68 0.011546 0.044482
GO:0003824 catalytic activity 27.27% (15/55) 0.88 0.012064 0.045727
GO:0043603 cellular amide metabolic process 5.45% (3/55) 2.64 0.012282 0.045814
GO:1901576 organic substance biosynthetic process 9.09% (5/55) 1.9 0.010624 0.048014
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_34 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_58 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_69 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_137 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_139 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_143 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_152 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_154 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_192 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_210 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_240 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_261 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_4 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_121 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_137 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_29 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_112 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_146 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_156 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_174 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_31 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_33 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_154 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_167 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_193 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_252 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_271 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_281 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_309 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_31 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_78 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_113 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (55) (download table)

InterPro Domains

GO Terms

Family Terms