Coexpression cluster: Cluster_112 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043038 amino acid activation 8.51% (8/94) 5.48 0.0 0.0
GO:0043039 tRNA aminoacylation 8.51% (8/94) 5.48 0.0 0.0
GO:0016875 ligase activity, forming carbon-oxygen bonds 8.51% (8/94) 5.48 0.0 0.0
GO:0004812 aminoacyl-tRNA ligase activity 8.51% (8/94) 5.48 0.0 0.0
GO:0006418 tRNA aminoacylation for protein translation 8.51% (8/94) 5.6 0.0 0.0
GO:0006399 tRNA metabolic process 9.57% (9/94) 4.79 0.0 0.0
GO:0140101 catalytic activity, acting on a tRNA 8.51% (8/94) 4.83 0.0 0.0
GO:0034660 ncRNA metabolic process 9.57% (9/94) 4.32 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 9.57% (9/94) 3.89 0.0 0.0
GO:0016874 ligase activity 8.51% (8/94) 4.2 0.0 0.0
GO:0006520 cellular amino acid metabolic process 8.51% (8/94) 4.11 0.0 0.0
GO:0140640 catalytic activity, acting on a nucleic acid 9.57% (9/94) 3.34 0.0 6e-06
GO:0044281 small molecule metabolic process 10.64% (10/94) 3.08 0.0 6e-06
GO:0006082 organic acid metabolic process 8.51% (8/94) 3.45 1e-06 1.1e-05
GO:0043436 oxoacid metabolic process 8.51% (8/94) 3.46 1e-06 1.1e-05
GO:0019752 carboxylic acid metabolic process 8.51% (8/94) 3.46 1e-06 1.1e-05
GO:0016859 cis-trans isomerase activity 5.32% (5/94) 4.73 1e-06 1.7e-05
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 5.32% (5/94) 4.73 1e-06 1.7e-05
GO:0003674 molecular_function 54.26% (51/94) 0.76 7e-06 8.8e-05
GO:0016070 RNA metabolic process 9.57% (9/94) 2.76 7e-06 9e-05
GO:1901363 heterocyclic compound binding 25.53% (24/94) 1.31 1.9e-05 0.000209
GO:0097159 organic cyclic compound binding 25.53% (24/94) 1.31 1.9e-05 0.000209
GO:0003824 catalytic activity 35.11% (33/94) 1.04 1.8e-05 0.000217
GO:0003676 nucleic acid binding 13.83% (13/94) 1.88 5e-05 0.000518
GO:0090304 nucleic acid metabolic process 9.57% (9/94) 2.35 6.8e-05 0.000669
GO:0016853 isomerase activity 5.32% (5/94) 3.37 0.000125 0.001187
GO:0046483 heterocycle metabolic process 10.64% (10/94) 2.07 0.000136 0.001246
GO:1901360 organic cyclic compound metabolic process 10.64% (10/94) 2.02 0.000179 0.001582
GO:0035639 purine ribonucleoside triphosphate binding 13.83% (13/94) 1.64 0.000259 0.002206
GO:0006139 nucleobase-containing compound metabolic process 9.57% (9/94) 2.06 0.000306 0.002515
GO:0000166 nucleotide binding 14.89% (14/94) 1.52 0.000338 0.002533
GO:1901265 nucleoside phosphate binding 14.89% (14/94) 1.52 0.000338 0.002533
GO:0003723 RNA binding 6.38% (6/94) 2.7 0.000332 0.002648
GO:0032555 purine ribonucleotide binding 13.83% (13/94) 1.57 0.0004 0.002907
GO:0017076 purine nucleotide binding 13.83% (13/94) 1.57 0.000417 0.002945
GO:0032553 ribonucleotide binding 13.83% (13/94) 1.56 0.00044 0.003016
GO:0005488 binding 32.98% (31/94) 0.85 0.000473 0.00316
GO:0097367 carbohydrate derivative binding 13.83% (13/94) 1.53 0.000523 0.003402
GO:0036094 small molecule binding 14.89% (14/94) 1.45 0.000544 0.003446
GO:0006725 cellular aromatic compound metabolic process 9.57% (9/94) 1.92 0.000641 0.003956
GO:1901564 organonitrogen compound metabolic process 14.89% (14/94) 1.42 0.000679 0.00409
GO:0005524 ATP binding 11.7% (11/94) 1.62 0.000897 0.005277
GO:0043168 anion binding 13.83% (13/94) 1.42 0.001103 0.006336
GO:0034641 cellular nitrogen compound metabolic process 10.64% (10/94) 1.66 0.001244 0.006982
GO:0030554 adenyl nucleotide binding 11.7% (11/94) 1.54 0.001399 0.007352
GO:0044237 cellular metabolic process 18.09% (17/94) 1.15 0.001386 0.00744
GO:0032559 adenyl ribonucleotide binding 11.7% (11/94) 1.54 0.001371 0.007524
GO:0046434 organophosphate catabolic process 2.13% (2/94) 4.88 0.002031 0.01045
GO:0006807 nitrogen compound metabolic process 15.96% (15/94) 1.11 0.00363 0.018298
GO:0043170 macromolecule metabolic process 14.89% (14/94) 1.15 0.003877 0.018777
GO:0071704 organic substance metabolic process 19.15% (18/94) 0.98 0.003805 0.018799
GO:0004820 glycine-tRNA ligase activity 1.06% (1/94) 7.69 0.00484 0.019925
GO:0006426 glycyl-tRNA aminoacylation 1.06% (1/94) 7.69 0.00484 0.019925
GO:0006419 alanyl-tRNA aminoacylation 1.06% (1/94) 7.69 0.00484 0.019925
GO:0004813 alanine-tRNA ligase activity 1.06% (1/94) 7.69 0.00484 0.019925
GO:0004832 valine-tRNA ligase activity 1.06% (1/94) 7.69 0.00484 0.019925
GO:0006438 valyl-tRNA aminoacylation 1.06% (1/94) 7.69 0.00484 0.019925
GO:0018208 peptidyl-proline modification 2.13% (2/94) 4.23 0.005027 0.020027
GO:0000413 protein peptidyl-prolyl isomerization 2.13% (2/94) 4.23 0.005027 0.020027
GO:0043167 ion binding 17.02% (16/94) 1.04 0.004217 0.020032
GO:0044238 primary metabolic process 18.09% (17/94) 0.99 0.004636 0.021206
GO:0008152 metabolic process 20.21% (19/94) 0.92 0.00457 0.0213
GO:0140096 catalytic activity, acting on a protein 9.57% (9/94) 1.36 0.008245 0.032327
GO:0008531 riboflavin kinase activity 1.06% (1/94) 6.69 0.009657 0.035078
GO:0008942 nitrite reductase [NAD(P)H] activity 1.06% (1/94) 6.69 0.009657 0.035078
GO:0098809 nitrite reductase activity 1.06% (1/94) 6.69 0.009657 0.035078
GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors 1.06% (1/94) 6.69 0.009657 0.035078
GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor 1.06% (1/94) 6.69 0.009657 0.035078
GO:0004175 endopeptidase activity 3.19% (3/94) 2.75 0.010108 0.036185
GO:0046168 glycerol-3-phosphate catabolic process 1.06% (1/94) 6.11 0.014451 0.046966
GO:0006072 glycerol-3-phosphate metabolic process 1.06% (1/94) 6.11 0.014451 0.046966
GO:0003714 transcription corepressor activity 1.06% (1/94) 6.11 0.014451 0.046966
GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity 1.06% (1/94) 6.11 0.014451 0.046966
GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity 1.06% (1/94) 6.11 0.014451 0.046966
GO:0052646 alditol phosphate metabolic process 1.06% (1/94) 6.11 0.014451 0.046966
GO:0018193 peptidyl-amino acid modification 2.13% (2/94) 3.48 0.013829 0.048795
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_12 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_34 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_86 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_98 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_102 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_135 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_141 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_149 0.058 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_151 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_185 0.071 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_227 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_247 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_4 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_9 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_37 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_40 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_97 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_103 0.042 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_122 0.046 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_156 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_84 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_51 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_68 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_99 0.037 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_103 0.036 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_118 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_120 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_142 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_149 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_152 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_170 0.137 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_171 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_177 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_247 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_256 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_267 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_278 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_297 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_23 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_38 0.034 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_67 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_88 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_90 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_99 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_118 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_127 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_136 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_137 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_145 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_154 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_165 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_169 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_181 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_183 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (94) (download table)

InterPro Domains

GO Terms

Family Terms