Coexpression cluster: Cluster_128 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0019001 guanyl nucleotide binding 8.0% (6/75) 3.65 8e-06 0.000542
GO:0032561 guanyl ribonucleotide binding 8.0% (6/75) 3.67 8e-06 0.000741
GO:0005525 GTP binding 8.0% (6/75) 3.67 8e-06 0.000741
GO:0034641 cellular nitrogen compound metabolic process 14.67% (11/75) 2.12 4e-05 0.001935
GO:0034645 cellular macromolecule biosynthetic process 9.33% (7/75) 2.83 5.7e-05 0.002219
GO:0006725 cellular aromatic compound metabolic process 12.0% (9/75) 2.24 0.000116 0.002479
GO:0046483 heterocycle metabolic process 12.0% (9/75) 2.24 0.000116 0.002479
GO:0016779 nucleotidyltransferase activity 5.33% (4/75) 3.87 0.000164 0.002875
GO:1901360 organic cyclic compound metabolic process 12.0% (9/75) 2.19 0.000149 0.002879
GO:0009059 macromolecule biosynthetic process 9.33% (7/75) 2.69 0.000106 0.002911
GO:0003723 RNA binding 8.0% (6/75) 3.02 9.6e-05 0.003085
GO:0044271 cellular nitrogen compound biosynthetic process 9.33% (7/75) 2.52 0.000213 0.003432
GO:0009058 biosynthetic process 12.0% (9/75) 2.1 0.000235 0.003485
GO:0006139 nucleobase-containing compound metabolic process 10.67% (8/75) 2.22 0.000314 0.004333
GO:0044249 cellular biosynthetic process 10.67% (8/75) 2.17 0.000386 0.004973
GO:0003676 nucleic acid binding 13.33% (10/75) 1.82 0.000493 0.005286
GO:1901363 heterocyclic compound binding 24.0% (18/75) 1.22 0.000469 0.005321
GO:0097159 organic cyclic compound binding 24.0% (18/75) 1.22 0.000469 0.005321
GO:1901576 organic substance biosynthetic process 10.67% (8/75) 2.09 0.000579 0.00559
GO:0003674 molecular_function 50.67% (38/75) 0.66 0.000611 0.005614
GO:0005488 binding 34.67% (26/75) 0.92 0.000561 0.005695
GO:0016070 RNA metabolic process 8.0% (6/75) 2.5 0.000666 0.00584
GO:0044237 cellular metabolic process 20.0% (15/75) 1.3 0.0009 0.007549
GO:0034654 nucleobase-containing compound biosynthetic process 5.33% (4/75) 3.12 0.001165 0.009367
GO:0097659 nucleic acid-templated transcription 4.0% (3/75) 3.74 0.001465 0.010878
GO:0006351 transcription, DNA-templated 4.0% (3/75) 3.74 0.001465 0.010878
GO:0043168 anion binding 14.67% (11/75) 1.5 0.001606 0.011482
GO:0008152 metabolic process 22.67% (17/75) 1.08 0.00204 0.014059
GO:0036094 small molecule binding 14.67% (11/75) 1.43 0.002352 0.015652
GO:0019438 aromatic compound biosynthetic process 5.33% (4/75) 2.79 0.002717 0.017477
GO:0090304 nucleic acid metabolic process 8.0% (6/75) 2.09 0.002825 0.017589
GO:0018130 heterocycle biosynthetic process 5.33% (4/75) 2.74 0.003057 0.018437
GO:0009987 cellular process 24.0% (18/75) 0.98 0.003323 0.019437
GO:0006189 'de novo' IMP biosynthetic process 1.33% (1/75) 8.02 0.003862 0.020703
GO:0033293 monocarboxylic acid binding 1.33% (1/75) 8.02 0.003862 0.020703
GO:0008658 penicillin binding 1.33% (1/75) 8.02 0.003862 0.020703
GO:0032774 RNA biosynthetic process 4.0% (3/75) 3.21 0.004212 0.021393
GO:1901362 organic cyclic compound biosynthetic process 5.33% (4/75) 2.62 0.004162 0.021712
GO:0000166 nucleotide binding 13.33% (10/75) 1.36 0.005245 0.025307
GO:1901265 nucleoside phosphate binding 13.33% (10/75) 1.36 0.005245 0.025307
GO:0035639 purine ribonucleoside triphosphate binding 12.0% (9/75) 1.43 0.005887 0.027712
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 2.67% (2/75) 4.06 0.006364 0.029245
GO:0034062 5'-3' RNA polymerase activity 2.67% (2/75) 3.89 0.008063 0.029926
GO:0045182 translation regulator activity 2.67% (2/75) 3.89 0.008063 0.029926
GO:0008135 translation factor activity, RNA binding 2.67% (2/75) 3.89 0.008063 0.029926
GO:0090079 translation regulator activity, nucleic acid binding 2.67% (2/75) 3.89 0.008063 0.029926
GO:0097747 RNA polymerase activity 2.67% (2/75) 3.89 0.008063 0.029926
GO:0032553 ribonucleotide binding 12.0% (9/75) 1.35 0.00834 0.030372
GO:0006807 nitrogen compound metabolic process 16.0% (12/75) 1.11 0.008583 0.030676
GO:0009127 purine nucleoside monophosphate biosynthetic process 1.33% (1/75) 6.43 0.011541 0.031821
GO:0009124 nucleoside monophosphate biosynthetic process 1.33% (1/75) 6.43 0.011541 0.031821
GO:0005338 nucleotide-sugar transmembrane transporter activity 1.33% (1/75) 6.43 0.011541 0.031821
GO:0009161 ribonucleoside monophosphate metabolic process 1.33% (1/75) 6.43 0.011541 0.031821
GO:0004150 dihydroneopterin aldolase activity 1.33% (1/75) 6.43 0.011541 0.031821
GO:0009156 ribonucleoside monophosphate biosynthetic process 1.33% (1/75) 6.43 0.011541 0.031821
GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity 1.33% (1/75) 6.43 0.011541 0.031821
GO:0090481 pyrimidine nucleotide-sugar transmembrane transport 1.33% (1/75) 6.43 0.011541 0.031821
GO:0009126 purine nucleoside monophosphate metabolic process 1.33% (1/75) 6.43 0.011541 0.031821
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 1.33% (1/75) 6.43 0.011541 0.031821
GO:0009123 nucleoside monophosphate metabolic process 1.33% (1/75) 6.43 0.011541 0.031821
GO:0015780 nucleotide-sugar transmembrane transport 1.33% (1/75) 6.43 0.011541 0.031821
GO:0009167 purine ribonucleoside monophosphate metabolic process 1.33% (1/75) 6.43 0.011541 0.031821
GO:0097367 carbohydrate derivative binding 12.0% (9/75) 1.33 0.009353 0.032821
GO:0032555 purine ribonucleotide binding 12.0% (9/75) 1.37 0.007839 0.032892
GO:0031406 carboxylic acid binding 1.33% (1/75) 7.02 0.007709 0.033063
GO:0046040 IMP metabolic process 1.33% (1/75) 7.02 0.007709 0.033063
GO:0006188 IMP biosynthetic process 1.33% (1/75) 7.02 0.007709 0.033063
GO:0017076 purine nucleotide binding 12.0% (9/75) 1.36 0.008059 0.033094
GO:0006396 RNA processing 4.0% (3/75) 2.65 0.012285 0.033396
GO:0071704 organic substance metabolic process 18.67% (14/75) 0.94 0.012479 0.033451
GO:0071705 nitrogen compound transport 4.0% (3/75) 2.73 0.010504 0.036201
GO:0071702 organic substance transport 4.0% (3/75) 2.68 0.011502 0.038946
GO:0000139 Golgi membrane 1.33% (1/75) 6.02 0.015359 0.040058
GO:0043177 organic acid binding 1.33% (1/75) 6.02 0.015359 0.040058
GO:0008150 biological_process 28.0% (21/75) 0.67 0.01676 0.043129
GO:0005737 cytoplasm 2.67% (2/75) 3.32 0.017227 0.043747
GO:0070569 uridylyltransferase activity 1.33% (1/75) 5.69 0.019162 0.047415
GO:0006760 folic acid-containing compound metabolic process 1.33% (1/75) 5.69 0.019162 0.047415
GO:0043167 ion binding 16.0% (12/75) 0.95 0.019525 0.047701
GO:0034470 ncRNA processing 2.67% (2/75) 3.21 0.01981 0.047791
GO:1901566 organonitrogen compound biosynthetic process 5.33% (4/75) 1.93 0.020812 0.049589
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_22 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_39 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_91 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_122 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_127 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_145 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_152 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_166 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_172 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_204 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_214 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_221 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_233 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_252 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_262 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_7 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_28 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_30 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_37 0.035 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_38 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_70 0.037 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_71 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_120 0.033 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_151 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_1 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_47 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_99 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_121 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_132 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_145 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_149 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_174 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_217 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_223 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_228 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_265 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_273 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_280 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_292 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_298 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_302 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_50 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_101 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_102 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_111 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_147 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_151 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_158 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (75) (download table)

InterPro Domains

GO Terms

Family Terms